Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1515 |
Symbol | |
ID | 5661912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1838982 |
End bp | 1841831 |
Gene Length | 2850 bp |
Protein Length | 949 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236103 |
Product | exo-alpha-sialidase |
Protein accession | YP_001501375 |
Protein GI | 157961341 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4409] Neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAGAA CAATTACATT AACGGCGCTA TTCATTACTT TATGCTCAAT GGGCTTTAGT AGTGGATATG CGCAAGCAAA TACATTGGTC GCAAATTTTG ATGCGATGAA TGAAACAAGC CCAACGATCC AAGGTTGGAG TGATTTCCTT TCGGGGCAAG CAACAGGCTC AGTTGCGCAA GATTTAAATG CCGCAAGTTG GAAGTCAACG GGAAGCAGCG GCAGAGCGCA ATGGAATATG GTTCCAACTA CCGAGCTTAA TAATGAGGCT AGTCTAAAAG GTTGGCGAAT GAGCTGGACT AGTCGCGTTG AGTCTGGCGG CTATATCACT GATTACTATG CAAATGGTGC TTTGCGTTTT CTACCAATAT TGAGTATTAG TGCGTCGGGA GATTTAGTCG TAAACCTAGT TGGGGGAGGT GAACATACAT TAGTTTCAGG AACGGGAGCG GATAGCTATC ATCAATACGT TGTTGAGTAT GATCCACTTA CTCAACTTGC TAGTTTCAGC TTTGATGGAG TGATAATTGA TCCTGCCTGG GTTGGTGAGG CCAGCAACCA AAATATGATT GCATGGGGAA ATGGTTCATC AAACATTAAT GGCGTTGCTT ATTATAGAGC TGTCACCTTT GAGACGCTCA GCGAAACCGT GCCAGAAGAA GCTAAGATTA TTGCAGCGTG GGACTCATCT GGGGTCACCT TTGATGGCGA AAGCCAATTT ATATCGATTA ATACCGAGCT TGCATCTGTA CAGCAACTGG CCCGAGGTAG CATATTTACC AAGTTTAAAG CCACTGGTAC AACAGCAACT CTTTTTAGTG CTTCCAATTC AGCCGTAGGT TCAAGTGAAT TTGCAATACT GATTAACGGT GATGGCACAT TACGGGTGCA TGCTCGAGAG AACGGCAGTT TTGTCAATGA CTCAAAAACC GTCACCACAT TCAATAATAA TCAAGAGCAC AAAGCACTGA TTATGGTAGA TGCAAACGGT ACCCAAATCT ATGTCGATGG CCGGTTAGCA TTCAGTGGTA ATGCAACTAG CTTTCTTAGC GCCATTGCGG GATTAGATAG CATGAATATT GGTCGTAACC ATGATAGTAA TGGTGGCCAA TGGTATTTCA GCGGCACCAT CGATGAAACT CGTATTTATG ACAATGTACT GACGGCAGAG CAAGCTGAGG ATCTCACTCG GTTATCGACT GTGGTGGCGA CTTTTGATAG TAACCTCAAT ACCGATCCCC TCTTGGCTGG CTGGACAAAT GATAGTGTGG ACTCTGGCGC AGGCAGCTTA GTTAACGAAC AAGGTCAAGC TGCTTGGCAG GCTAGAGGTA TAAATGGCCG AGCTGAGTGG GAAATACAGC CTAGCGTGCA AGTTAATCGA GATGCGACAA CCTTAGGCTG GAAAATGACC ACCACAAGTC GAATCGTGTC GGGCAGTGCG ATTTCTGATT ACTACGCAAA TGGTAATAAA CGCTTTTTAG CTTTGTTAAG TATCAATGGC AATGGTGACT TAGTCGCAGC GTTGGAGGGA GGCAGTAGTC ATACATTAGT GCCGATGACT GGTGCAGATA AGTACCATAC CTATGAAGTG ACTTACGATG TTGAAACGAG CTTAGCGACG TTTTATTTTG ACGGTATTGC AATCGAAACT TGGGCTGGTT CTGCTACCAG TCAGAATGTC ATAGTGTGGG GAAATGGCTC TTCTGGCACA AATGGTGTTG CCAATTACCG TTATGTCAAC TTTGAGACCT TTGGTAGTGG TCCGGCTATC TTTGAAAGTA TTGTTTTTCA AGGAGGTCAA GAAGGCGATG ATGGTATGAG TCATTATCGA ATCCCTTCCA TGGTCCAATC TGCAGATGGC TCAATACTGG CGTTTATTGA AGGCCGTCCA AGTGGTGGAG ATCCTGGGCA AGTGGGTCAG ATTAACATCT CTTTAAAACG TTCAATTGAT AATGGACGTA GCTGGCTACC TGTGCAGATT ATTCATCAAG ATCCAGCGTT TGATTATTCA GATCCCCGTC CATTTGTTGA TAAATCGACA AATACGGTTT ATGTATTTTA TGTGCAGTGG CCAGACTTAT GTGCGCAAAA TGGCAACTGT GTCGCCCCTG ATGATGCCAA CTATTTGTAT TATCGAAAAA GTATTGATAA TGGACTGACA TGGTCAGCCG CAGTAGATGT TACTTCGCAA GTTAAAGATC CGACTTGGCG ATCAATAAAC CCAGGCCCAG GACAAGGGAT CCAATTGCAA TGGCAGACTT TAGCTCAAGG TGAGCACAAT GGCAGAATGA TTTTTCCAGC CATAGTGCGT GCTGGTAATA GCCTTTTTTA TGTTGCGACA GTGTTTAGTG ACGACAATGG CTTAACTTGG CATAAAGGTG AGTTTACGCC TGTTTCTGGA CCGACCGAAG CTGATATGGT TGAGCTTAAT GATGGAACAT TATTATTGTC CGCTCGCAAT GATGGGGGGG CAGCAGGTAC TCGTTATCAC TTCTTGAGTC ATGATGGCGG GATCACCTGG ACGCAAACAA GTCATGACTT GGCTGTTTCT AAGGTTGATA TTGGGCTCAC CCGATTTTCA GCGATAAGAG CGGGAGATGC TGAAGATCTT ATCATTGCTA CTGCGCCCAT AGGTACAACA TCAGGCCCTA ATCGTAATAA CTTGGGGATT TGGGTCAGTA CCGATGAAGG GGCTAATTTT GGCACTCCTC ATCAATTAGT TTATGGCATG AGTGCCTATT CTGATGTGGT AAGGTTAAAT GACGGCTCTA TTGGTGTGAT TTATGAGGCG ACGGGAAGCA CGCTGTTGAA GTTTCTAAAC TTTGAGCTGA GCAGCCTTGA GCGGCAGTAG
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Protein sequence | MLRTITLTAL FITLCSMGFS SGYAQANTLV ANFDAMNETS PTIQGWSDFL SGQATGSVAQ DLNAASWKST GSSGRAQWNM VPTTELNNEA SLKGWRMSWT SRVESGGYIT DYYANGALRF LPILSISASG DLVVNLVGGG EHTLVSGTGA DSYHQYVVEY DPLTQLASFS FDGVIIDPAW VGEASNQNMI AWGNGSSNIN GVAYYRAVTF ETLSETVPEE AKIIAAWDSS GVTFDGESQF ISINTELASV QQLARGSIFT KFKATGTTAT LFSASNSAVG SSEFAILING DGTLRVHARE NGSFVNDSKT VTTFNNNQEH KALIMVDANG TQIYVDGRLA FSGNATSFLS AIAGLDSMNI GRNHDSNGGQ WYFSGTIDET RIYDNVLTAE QAEDLTRLST VVATFDSNLN TDPLLAGWTN DSVDSGAGSL VNEQGQAAWQ ARGINGRAEW EIQPSVQVNR DATTLGWKMT TTSRIVSGSA ISDYYANGNK RFLALLSING NGDLVAALEG GSSHTLVPMT GADKYHTYEV TYDVETSLAT FYFDGIAIET WAGSATSQNV IVWGNGSSGT NGVANYRYVN FETFGSGPAI FESIVFQGGQ EGDDGMSHYR IPSMVQSADG SILAFIEGRP SGGDPGQVGQ INISLKRSID NGRSWLPVQI IHQDPAFDYS DPRPFVDKST NTVYVFYVQW PDLCAQNGNC VAPDDANYLY YRKSIDNGLT WSAAVDVTSQ VKDPTWRSIN PGPGQGIQLQ WQTLAQGEHN GRMIFPAIVR AGNSLFYVAT VFSDDNGLTW HKGEFTPVSG PTEADMVELN DGTLLLSARN DGGAAGTRYH FLSHDGGITW TQTSHDLAVS KVDIGLTRFS AIRAGDAEDL IIATAPIGTT SGPNRNNLGI WVSTDEGANF GTPHQLVYGM SAYSDVVRLN DGSIGVIYEA TGSTLLKFLN FELSSLERQ
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