| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1513 |
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| Symbol | |
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| ID | 5661910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1834262 |
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| End bp | 1837156 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236101 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001501373 |
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| Protein GI | 157961339 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCA ATCAAAGGAT GTTTTGCCGC AGCGCACTGT CATTATGTAT TGCTGGATTA
TTTAGTTCTG CAGCTATAGC AAATGACGCG GAGCAAGAAA GTGACAATGT TGAAAGAATT
GTTGTCACTG GTTCTAATAT TTTTAAGGGC AGCGCTAACG CTTCATCTTC AGCGCCGATT
ACTGAGATTG GTAAAGACGC CATTGAAGGT GTTGCAGCTA TTTCTATTGG TGATGTACTG
AATAAAATCC CTTCTGTTAC TGCATCGATA AATGGTTCAA GCGATAACGT ATCACTGGGT
GGTGCGGGTA GTAATGTTGG TGTTTCAACC ACTTCACTGC GTAACTTAGG CTCTGCGCGT
ACATTGGTTT TGGTTAATGG ACGCCGTTAT GTATCTGGTG TTTCCGCTAA TACTGGTTAC
GGTGTTGACT TAAACTCCAT CCCAACCGCA ATTATCGAGC GTGTCGATGT ATTGACTGGT
GGTCAATCTG CAATTTACGG TTCTGATGCG ATTGCAGGTG TGATTAATAT TATTACTAAG
CAAGATTATG ATGGCTTAGA GTTTAACGCC TTTGCCGCTG ATTCAACCGA AGGCGGTGGA
GGTCGACAGA ATGTCGATTT TACTTATGGT CAGAATTTCG ATTCAGGTAA TGCATGGGTA
TCAGTTGGTT ATTCTAATCA AGACGTACTA AATTCTTCAG ACCGTGACTT TTCTAAGTAT
GAAATGCGTT TTCTCGATAC AAACGGAGAC GGTATTAGAG ACTCGATTGC TAGACGAGAT
GGCCCTGGCC ACGTTGACGG TGCCTCACTG GGTTATGGTG ACTTAAAAAT CTTTGGTAAT
GGCGATCCGT TCAATACTAA TCAGCCTTTA CTCGATGGTA ACTATCAACC AATGGGAGAG
TCTGACTGGG ATAACCAGCA CGCAAACCGT ACTCTTGTTA CGCCATTCGA ACGTTTTAAT
GTCGCTTCCG GTATTAGCTT CGATGTATCT GAAAACTCGG CTTTTGAGGT TGAAATTAAT
TACGCACAAA CAAAAGCACG TGTTGATCTA GAAGAAGCGC CAATCGATGT AGTAAACAAT
ATTTTTAGAA AAGGTGATGG CGGAACAACA GGTATCGATG TCGCAACAAG TCCTTTCTTC
GTGGGAAGTA GTGCAGGGCA GCAACTTCTT GCGGTTATGG GGTCGGATAC TTCCCTTGAT
GGCGTATCCA CTAACCGTCG TACCTTTGAG TTCGGCAATC GACTCACAGA GAACCATCGT
GAAACATTCC GTATTGCGGG CAGTTATAGC TACTATTTTG ACAATGATTT AGATTGGAAA
ACAAGTGCGA CATACGGTAT TACCTCACAG CAACAAAATA ACAGTGGTGA CTTTAGTATT
CCGCATATGC AGCAAGCGGT TACGATTGAA GAAGATGGTA ATGGTGGTTA CCAGTGTGCT
GATGAAATAG CACGTATTTA CGGATGTTTA CCGGTTAATC CATTTGGTAC AACAGACAGC
TTAGCCGGAC AAGCAGGGAT TGTCGGTTTT TCTGATGAAG CCAGAAAGTA CCTTGCCGTT
GCTACCGGCC AGACCGGCAA AGTTGAGCAA TTTGTTGCTA CTAGTGTAGT TTCTGGTGAG
CTGGATTTGT CAGTTGGTCA CGACAATATG GGCTTTGCTG CGGGTCTTGA GTACCGTAAA
GAGTCAGCTG TTGAAAACCC AGATAGTTTC CGTCAGCTAG GCATTACACG TGAAGGTGCG
GTTCAGCCCA TCGACGGTAG TTTCGATGTC GCCGAAATTT TTGGTGAGCT TTATATTCCA
GTCGCTGATT GGCTGAATGT GAGTTTAGCG GGCCGTGTGG GCGACTACTC TACAATCGGT
ACCACATCAA CTTATCGACT CGGTCTAGAT GCACCCATTA ATGATGTGAT TCGTCTTCGT
GCGAGTCAAT CAAGCTCTGT GCGCGCGCCA AACATTAATG ATATCTTTTC TACAGGAACA
ACCAGCGTCG CTAACCCTAC CATTGATGTT TGTAACGGTA CGACTAATTC GGGCACGTCG
AATAGAGATG TAAACTGTAG CTCGATTGCC GCTATCTCCA ACCGAATGGC GACCGATCCA
AATGGTGAGT ATGTATTGGT TGGCTCAGAA ACCAATAATA CTTTAGTAAT GCAGAGCGGC
TCTCCAGATC TTAAAGAGGA GACTGCTGAT TCATTAACTT TAGGATTTGT TGTAACGCCG
ATAGATAATT TATACGTTTC ACTCGATTAT TATGATATCG AAATTGAAGA TGGTATTACC
ACAATCACTC CCGATATTAT GGTTGAGCGT TGTTATGACG CTGACCCATC ACAATTTGAT
GCAAGCTGTG GCGGCAAAGT CGTGCGTGAC GTAAAAGACG GTCCAATTCT AAATATTTAC
TCTACATCAA TTAATGCCGA CACCATTTCA ACTAGCGGTT TAGATCTTGA GATAGGTTAC
TCGCTTGAAG ATTTACATTT GAATTTAATC GCTAACTACC TTGGTGAATA CGAAATCGAT
ACACCTGGTG GAAAAATTGA TAATTTAGGA AAAACCCTAT TCCCTGAGTA TCGTTATACG
ATGAATGCCT CTTATGACAT TACTGATGCT TTTAACTTAT ATGCACAGTT GACTTACCGC
TCTGAAACTA AGGGTGTGCT TGGTGAAACG ACGCTGTCGG ATGATCTTAA TACCATGGAT
GCGGTTTACT ATGTTGATCT TAGAGCTAGT TACCAAATAA ATGATGCTGT TAATGTTTAT
CTTGGCTCAA ATAATTTATT TGATGAGCAG CCAGATATTC AGGCGACAAG TGCGGCAGTA
GGTACTAATA CTACGCCTCA AGCTTATGAT GTTATTGGTC GTCAAATCTT TGCTGGTGTT
AAATTGACAT TCTAA
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| Protein sequence | MNTNQRMFCR SALSLCIAGL FSSAAIANDA EQESDNVERI VVTGSNIFKG SANASSSAPI
TEIGKDAIEG VAAISIGDVL NKIPSVTASI NGSSDNVSLG GAGSNVGVST TSLRNLGSAR
TLVLVNGRRY VSGVSANTGY GVDLNSIPTA IIERVDVLTG GQSAIYGSDA IAGVINIITK
QDYDGLEFNA FAADSTEGGG GRQNVDFTYG QNFDSGNAWV SVGYSNQDVL NSSDRDFSKY
EMRFLDTNGD GIRDSIARRD GPGHVDGASL GYGDLKIFGN GDPFNTNQPL LDGNYQPMGE
SDWDNQHANR TLVTPFERFN VASGISFDVS ENSAFEVEIN YAQTKARVDL EEAPIDVVNN
IFRKGDGGTT GIDVATSPFF VGSSAGQQLL AVMGSDTSLD GVSTNRRTFE FGNRLTENHR
ETFRIAGSYS YYFDNDLDWK TSATYGITSQ QQNNSGDFSI PHMQQAVTIE EDGNGGYQCA
DEIARIYGCL PVNPFGTTDS LAGQAGIVGF SDEARKYLAV ATGQTGKVEQ FVATSVVSGE
LDLSVGHDNM GFAAGLEYRK ESAVENPDSF RQLGITREGA VQPIDGSFDV AEIFGELYIP
VADWLNVSLA GRVGDYSTIG TTSTYRLGLD APINDVIRLR ASQSSSVRAP NINDIFSTGT
TSVANPTIDV CNGTTNSGTS NRDVNCSSIA AISNRMATDP NGEYVLVGSE TNNTLVMQSG
SPDLKEETAD SLTLGFVVTP IDNLYVSLDY YDIEIEDGIT TITPDIMVER CYDADPSQFD
ASCGGKVVRD VKDGPILNIY STSINADTIS TSGLDLEIGY SLEDLHLNLI ANYLGEYEID
TPGGKIDNLG KTLFPEYRYT MNASYDITDA FNLYAQLTYR SETKGVLGET TLSDDLNTMD
AVYYVDLRAS YQINDAVNVY LGSNNLFDEQ PDIQATSAAV GTNTTPQAYD VIGRQIFAGV
KLTF
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