Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1498 |
Symbol | ndk |
ID | 5661895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1817514 |
End bp | 1817945 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641236086 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_001501358 |
Protein GI | 157961324 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.300953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATCG AACGTACTTT TTCTATCATT AAGCCTGATG CAGTTGCAAA AAACCACATT GGCGCTATCT ACAACCGTTT TGAAACGGCT GGCCTGAAAA TCATCGCTTC TAAAATGATT CACCTAAGCA AAGAACAAGC TGAAGGTTTC TACGCTGAGC ACAGCGAGCG TCCATTCTTT GGTGCACTAG TTGCATTCAT GACGTCTGGT CCAATCATGG TGCAAACTCT TGAAGGCGAA AACGCCGTTC TAGCTCACCG TGAAATCTTA GGTGCAACTA ACCCTGCTGA AGCGGCTGAA GGTACTATCC GTGCTGATTT CGCAGAAAGC ATCGATGAGA ACGCTGCTCA TGGTTCTGAT TCTGTAGCAT CTGCAGAGCG TGAAGTTGCT TACTTCTTCA GCGCTGAAGA GCTATGCCCA CGCACTCGTT AA
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Protein sequence | MAIERTFSII KPDAVAKNHI GAIYNRFETA GLKIIASKMI HLSKEQAEGF YAEHSERPFF GALVAFMTSG PIMVQTLEGE NAVLAHREIL GATNPAEAAE GTIRADFAES IDENAAHGSD SVASAEREVA YFFSAEELCP RTR
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