Gene Spea_1492 details

Gene Information

• Locus tag: Spea_1492
• Symbol: hscA
• ID: 5661889
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1812476
• End bp: 1814338
• Gene Length: 1863 bp
• Protein Length: 620 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641236080
• Product: chaperone protein HscA
• Protein accession: YP_001501352
• Protein GI: 157961318
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTTT TGCAGATAGC AGAGCCTGGA CAGAGCGCTG CTCCCCACCA ACATCGTCTC 
GCAGTCGGGA TTGATTTAGG CACCACTAAC TCTCTTGTTG CTGCGGTACG TAGCGGCGTG 
GCGAATACTT TACCCGATGA AGATTCACAG CATTCATTGC CTTCTGTCGT CCGATATACC 
CAAGACAGTG TTTTAGTTGG CCGTGAAGCG GAAGCATTCT CTGCTCAAGA CCCACAAAAT 
ACCATAGTGT CGATTAAGCG CTTTATGGGT CGTAGTCTCG AAGATATTCA GTCGGGCGAT 
CAGACTCTGC CGTACATTTT CGAAGCCAGT GAAAACGGTT TACCCATTTT TGTTACTCCA 
AGCGGCAAAG TTAATCCGGT TCAGATTTCA TCAGAGATCT TAAAGCCGCT GGTGGCACGA 
GCTGAGTTGA CGTTAGGTGG CACGCTAGAA GGTGTGGTGA TCACCGTTCC TGCTTATTTT 
GATGATGCAC AACGTCAAGG CACTAAAGAT GCAGCATCCT TAACAGGCGT TAAAGTGTTA 
CGCCTGTTAA ACGAGCCGAC TGCAGCGGCA ATTGCTTATG GCTTAGACTC AGGCCAAGAA 
GGCGTGATTG CAGTCTACGA CTTAGGCGGC GGCACATTTG ATATTTCAAT TTTACGTTTG 
AACAAAGGCG TGTTTGAGGT GTTAGCTACC GGCGGTGATT CAGCCTTAGG TGGAGATGAC 
TTCGACCATA TGCTGCAAGC ATATTTCGCC GAGCAATGGC AGGTTAGCTC TGCTAGCGCC 
AGTATGAACC GTAAAATGCA AATTGAAGCG AGACGCGTAA AAGAAGCATT AACAGAGTCT 
GCTGAGACGA CGGCTTCAGT GGTTGATGAT GCTGGTACAA AACTGACGTT AACGGTTACG 
CGTGAGCTGT TTGATAGCTT AATAGCTAAG TTAGTTAAAA AGACTATCAG TAGCTGTCGC 
CGCGCATTGC GTGATGCTGG CGTGAGTAAC GACGAAGTGC TGGAAACCGT GATGGTCGGC 
GGCTCGACAC GTGTGCCTTT AGTACGCCAA GAAGTTGAAA GCTTCATGGG GAAGACCCCG 
CTAACGTCTA TTGACCCTGA TCGCGTAGTT GCCATTGGCG CCGCCATTCA AGCCGATATT 
TTAGTCGGTA ATAAGCCAGA GTCTGACTTG TTATTGCTCG ATGTGATCCC GCTGTCATTG 
GGTATTGAGA CCATGGGCGG ACTAGTTGAG AAAGTTGTCT CCCGCAATAC CACTATCCCA 
GTAGCCAGAG CGCAAGAGTT TACCACCTTC AAAGATGGGC AAACTGCGAT GGCATTCCAT 
GTGGTTCAAG GTGAGCGTGA GTTAGTGGCA GATTGTCGCT CACTTGCTAG GTTTACCTTA 
AAGGGAATTC CACCGCTTGC GGCTGGTGCG GCGCATATTC GAGTGACCTT CCAAGTGGAT 
GCTGATGGCT TGTTAAGTGT AACAGCCATG GAGAAGTCGA CGGGTGTTCA GGCAAGTATT 
CAGGTTAAGC CATCATTTGG TTTAAGCGAT GAAGAAATTG GTAGCATGCT AAAAGACTCA 
ATGGCAAATG CCAAAGAGGA TATTACTCGC CGTATGCTGG CCGAGAAACA AGTTGAAGCC 
GCTCGCGTGC TTGAGTCATT AAACGCAGCG TTAAGTAAAG ATAGTGACTT GCTGTCTGTT 
GATGAGCGAG GCGTTATTGA AGCCAATATG GCATCGCTTG CACAGATTGC TAGCGAAGAC 
GATGCCGATG CTATCGAAGC GGCTATAGAA GTATTAGATA CAGCGACGCA GGACTTTGCT 
GCTAAGCGTA TGGATAATTC AATTCGACTC GCTCTAAAAG GGCAGTCGGT TGACAATATA 
TAG 

 

Protein sequence

MALLQIAEPG QSAAPHQHRL AVGIDLGTTN SLVAAVRSGV ANTLPDEDSQ HSLPSVVRYT 
QDSVLVGREA EAFSAQDPQN TIVSIKRFMG RSLEDIQSGD QTLPYIFEAS ENGLPIFVTP 
SGKVNPVQIS SEILKPLVAR AELTLGGTLE GVVITVPAYF DDAQRQGTKD AASLTGVKVL 
RLLNEPTAAA IAYGLDSGQE GVIAVYDLGG GTFDISILRL NKGVFEVLAT GGDSALGGDD 
FDHMLQAYFA EQWQVSSASA SMNRKMQIEA RRVKEALTES AETTASVVDD AGTKLTLTVT 
RELFDSLIAK LVKKTISSCR RALRDAGVSN DEVLETVMVG GSTRVPLVRQ EVESFMGKTP 
LTSIDPDRVV AIGAAIQADI LVGNKPESDL LLLDVIPLSL GIETMGGLVE KVVSRNTTIP 
VARAQEFTTF KDGQTAMAFH VVQGERELVA DCRSLARFTL KGIPPLAAGA AHIRVTFQVD 
ADGLLSVTAM EKSTGVQASI QVKPSFGLSD EEIGSMLKDS MANAKEDITR RMLAEKQVEA 
ARVLESLNAA LSKDSDLLSV DERGVIEANM ASLAQIASED DADAIEAAIE VLDTATQDFA 
AKRMDNSIRL ALKGQSVDNI