Gene Spea_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1485 
Symbol 
ID5661882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1807534 
End bp1808298 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content46% 
IMG OID641236073 
ProductRNA methyltransferase 
Protein accessionYP_001501345 
Protein GI157961311 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0403715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGCA ATATTCGCGT CGTTCTTGTC GGTACTTCCC ATCCAGGGAA TATAGGTTCT 
ACAGCCCGTG CTATGAAAAC CATGGGGTTA TCCACTTTAT ATTTGGCAGA GCCAAAGGTT
GAGCCAGATG GCCACTCTAT TGCGTTAGCC GCTGGTGCTT CAGATATTCT TAAACATGCT
ATTACCGTTA GCTCTGTAGA AGAAGCCATC GCCGATTGTA GCCTTGTTAT CGCAACCAGT
GCTCGTAGTC GCACTTTGGA CTGGCCAATG CTTGAGCCAC GTGAAGCGGG TGAGAAGCTA
GTGGGTTCTG CGCTTAATGG CCCTGTGGCG ATTGTATTTG GTCGTGAGAA TAACGGTTTG
ACTAATGAAG AGCTACAGCG CTGTGATTAC CACGTCGCTA TTCCGGCAAA CCCTGAATAT
ACTTCTTTGA ATCTGGCCCA AGCGGTACAG ATTATCTGTT ATGAGGCGCG AGTGGCACAT
CTTGCTCAAG TGCAAAACTC TGCAGAAGCT GTGATCGAAA CAGAAAGTGA AGAGGCTCAA
GAAGACTTTC CATCATCAAA AGAGCGTGAG AATTTCTTCG AGCATCTAGA GAATACGCTT
TTTTCGACAA ACTTTATCGT CAAAAACCAT CCTGGCCAGA TAATGACTAA GTTACGTCGC
CTATTTAGCC GTACCCGAAT TGAACGCCAA GAGATGAATA TCTTGCGCGG TATATTGACC
TCGATTGATA AAGTCGTCGC TAAAAGTGAG ACTAAAGATA AGTAA
 
Protein sequence
MLSNIRVVLV GTSHPGNIGS TARAMKTMGL STLYLAEPKV EPDGHSIALA AGASDILKHA 
ITVSSVEEAI ADCSLVIATS ARSRTLDWPM LEPREAGEKL VGSALNGPVA IVFGRENNGL
TNEELQRCDY HVAIPANPEY TSLNLAQAVQ IICYEARVAH LAQVQNSAEA VIETESEEAQ
EDFPSSKERE NFFEHLENTL FSTNFIVKNH PGQIMTKLRR LFSRTRIERQ EMNILRGILT
SIDKVVAKSE TKDK