Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1485 |
Symbol | |
ID | 5661882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1807534 |
End bp | 1808298 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641236073 |
Product | RNA methyltransferase |
Protein accession | YP_001501345 |
Protein GI | 157961311 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0403715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAGCA ATATTCGCGT CGTTCTTGTC GGTACTTCCC ATCCAGGGAA TATAGGTTCT ACAGCCCGTG CTATGAAAAC CATGGGGTTA TCCACTTTAT ATTTGGCAGA GCCAAAGGTT GAGCCAGATG GCCACTCTAT TGCGTTAGCC GCTGGTGCTT CAGATATTCT TAAACATGCT ATTACCGTTA GCTCTGTAGA AGAAGCCATC GCCGATTGTA GCCTTGTTAT CGCAACCAGT GCTCGTAGTC GCACTTTGGA CTGGCCAATG CTTGAGCCAC GTGAAGCGGG TGAGAAGCTA GTGGGTTCTG CGCTTAATGG CCCTGTGGCG ATTGTATTTG GTCGTGAGAA TAACGGTTTG ACTAATGAAG AGCTACAGCG CTGTGATTAC CACGTCGCTA TTCCGGCAAA CCCTGAATAT ACTTCTTTGA ATCTGGCCCA AGCGGTACAG ATTATCTGTT ATGAGGCGCG AGTGGCACAT CTTGCTCAAG TGCAAAACTC TGCAGAAGCT GTGATCGAAA CAGAAAGTGA AGAGGCTCAA GAAGACTTTC CATCATCAAA AGAGCGTGAG AATTTCTTCG AGCATCTAGA GAATACGCTT TTTTCGACAA ACTTTATCGT CAAAAACCAT CCTGGCCAGA TAATGACTAA GTTACGTCGC CTATTTAGCC GTACCCGAAT TGAACGCCAA GAGATGAATA TCTTGCGCGG TATATTGACC TCGATTGATA AAGTCGTCGC TAAAAGTGAG ACTAAAGATA AGTAA
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Protein sequence | MLSNIRVVLV GTSHPGNIGS TARAMKTMGL STLYLAEPKV EPDGHSIALA AGASDILKHA ITVSSVEEAI ADCSLVIATS ARSRTLDWPM LEPREAGEKL VGSALNGPVA IVFGRENNGL TNEELQRCDY HVAIPANPEY TSLNLAQAVQ IICYEARVAH LAQVQNSAEA VIETESEEAQ EDFPSSKERE NFFEHLENTL FSTNFIVKNH PGQIMTKLRR LFSRTRIERQ EMNILRGILT SIDKVVAKSE TKDK
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