| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1478 |
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| Symbol | |
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| ID | 5661875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1800580 |
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| End bp | 1802019 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236066 |
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| Product | carbon starvation protein CstA |
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| Protein accession | YP_001501338 |
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| Protein GI | 157961304 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0606674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTGGT TTTTCCTTTG TGTCGGTCTG TTGATCGGTG GCTACTTTAT TTATGGTGCA
TTTGTAGAAA AAGTTTTCGG CATCAATGCC AAGCGCCAAA CCCCCGCTTT TACAAAGACA
GACGGCGTCG ATTACGTTCC TATGTCAAAA GGTAAAGTGT ACTTAATTCA GCTACTCAAC
ATCGCAGGTG TGGGCCCAAT CTTTGGTCCA ATCCTTGGTG CACTTTATGG CCCAGCGGCC
ATGCTATGGA TCGTACTAGG TTGTATCTTC GCAGGTGCTG TCCACGACTA CTTCTCTGGT
ATGTTGTCGG TTCGCAACAA CGGCGAGTCA GTGCCAAGTC TTGCTGGTAA ATACTTAGGT
AAAGGCGCTA AGCACTTTAT GAACGTGTTT GCTATTATCT TACTGCTGTT AGTTGGTGTG
GTATTTATCT CTGCTCCAGC GGGCCTTTTA GCTAAGCTAA CAGGTTGGGA TTTGAGCATT
TTCGTTGGCA TTATCTTCTT CTATTATTTA ATTGCGACTA TCGTACCTGT AGACAAGATT
ATTGGCCGCC TCTACCCGTT CTTCGGTGCA TTATTAGTGT TTATGTCGGT TGGTTTAACC
ATCGCATTAA TCGTCTCTAG TGAGCACAGC TTATTGCCTG GCGTTGAAAT CGGCGACTTC
CTAACAAACC TTAACCCGAA TGACATGCCA CTATGGCCAG CGCTATTCAT CACTATTGCT
TGTGGTGCGA TTTCAGGCTT CCATGCAACT CAGTCACCGT TGATGGCACG TTGTGTTGAA
AATGAATCAA ATGGCCGCTT TGTGTTCTTT GGTGCAATGA TTGGTGAAGG TATTATCGCG
CTTATCTGGT GTGCTATTGC ATTATCGTTC TTTGGCGGTG TTGAAGGTCT AAACGCAGGT
ATGGCGGGTA ACCCTGCAAA CGTGGTTTAT GAAGCATCTA CTGGTCTTCT AGGCGCTGTA
GGTGGTTTCC TGGCGGTATT AGGTGTAATC GTATTGCCAA TTACCTCTGG CGACACGGCT
TTCCGTAGTG CGCGTTTGAT TTTAGCTGAA TTCTTCAAAA TGCCACAAAC TGAGCTACCA
AAGCGTTTGA TGTTTGCTAT TCCACTGTTT GCAGCTGGCG CAGTATTAAC TCAAGTAGAC
TTTGGTGTAA TTTGGCGCTA CTTCGGCGTG GCAAACCAAG CGACTGCTGT AATGATGTTA
TGGACTGCGT CTGCTTACCT ACTGCGTCTA AACAAGTTCC ACTGGATCTG TACGATTCCA
GCCATGTTTA TGACCACAGT TGTGATTAGC TTTATGCTTA GCTCTCCAAC TCTTGGCGCT
GGTCTACCAA TAATGTTATC GACAATTGCG GGTATCGTAT CGACCTTAGT GATCACAGGT
TTGGTGATGA TTAGGACCAA AGGCAAAGGC GAAATTGAAG CCGTAGCTGA AGAGTCATAA
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| Protein sequence | MSWFFLCVGL LIGGYFIYGA FVEKVFGINA KRQTPAFTKT DGVDYVPMSK GKVYLIQLLN
IAGVGPIFGP ILGALYGPAA MLWIVLGCIF AGAVHDYFSG MLSVRNNGES VPSLAGKYLG
KGAKHFMNVF AIILLLLVGV VFISAPAGLL AKLTGWDLSI FVGIIFFYYL IATIVPVDKI
IGRLYPFFGA LLVFMSVGLT IALIVSSEHS LLPGVEIGDF LTNLNPNDMP LWPALFITIA
CGAISGFHAT QSPLMARCVE NESNGRFVFF GAMIGEGIIA LIWCAIALSF FGGVEGLNAG
MAGNPANVVY EASTGLLGAV GGFLAVLGVI VLPITSGDTA FRSARLILAE FFKMPQTELP
KRLMFAIPLF AAGAVLTQVD FGVIWRYFGV ANQATAVMML WTASAYLLRL NKFHWICTIP
AMFMTTVVIS FMLSSPTLGA GLPIMLSTIA GIVSTLVITG LVMIRTKGKG EIEAVAEES
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