| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1471 |
|---|
| Symbol | yajC |
|---|
| ID | 5661868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1794316 |
|---|
| End bp | 1794648 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641236059 |
|---|
| Product | preprotein translocase subunit YajC |
|---|
| Protein accession | YP_001501331 |
|---|
| Protein GI | 157961297 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1862] Preprotein translocase subunit YajC |
|---|
| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000169079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTATTT CAAACGCATA TGCAGCTGAT GCACCTGTTG GTGGCGCTGG TGGTACGATG
GAACTGATTT TCATGTTGGT CATCTTTGGC CTAATTTTTT ACTTCATGAT TTTCCGTCCA
CAATCTAAGC GCGTTAAAGA GCACAAGAAC CTAATGAGCT CTTTGAGCAA AGGTGATGAA
GTGCTAACAA GCGGTGGTAT TTTAGGTAAG ATCGCCAAAA TTAGTGATGA AAACGACTAC
GTTTTGTTGA CTATCAACGA GACGAGTGAA ATCACGATTA AGAAGGATTA TATTGCGGCC
GTATTGCCAA AAGGCTCTAT TAAGTCACTT TAA
|
|---|
| Protein sequence | MFISNAYAAD APVGGAGGTM ELIFMLVIFG LIFYFMIFRP QSKRVKEHKN LMSSLSKGDE
VLTSGGILGK IAKISDENDY VLLTINETSE ITIKKDYIAA VLPKGSIKSL
|
|---|
| |