| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1467 |
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| Symbol | |
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| ID | 5661864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1790099 |
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| End bp | 1790752 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236055 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001501327 |
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| Protein GI | 157961293 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATAT TTAGCTATAA GCCCCCCAGT ATTCCTTGGT TAGATATCCG TTATCTCGAC
CGAGATATTA TCGTAATCAA TAAGCCATCA GGTTTGCTAT CAAATCCAGG GATCGCTGAA
TACACCCACG ATTGTGCACT CACACGCCTG CAACAGCGAT TTAAAGACTG CATACTTGTG
CACCGCTTAG ACTGCGCAAC GTCAGGCATC ATGGTATTTG CTCGTAACAA GAAAGCCGAG
TCAAACCTAA AAACCCAGTT TCAAGATAGA CAAACACAGA AGACTTACAT CGCAGAGGTT
GATGGTATAT TCAAACTGCA AAGTGGTGTG ATTGAATTGT CTATTGCTGC AGATAAACTC
AATCCACCAA AGCAGATGGT CAGTGAGTTA GGCAAGGCTG CGATAACACA TTATAAAGTT
TTACAACAAA AACCTCACAG CACTCTTGTC GAACTCAAAC CTGTCACGGG GAGAACCCAC
CAACTAAGGG TGCATATGTT AGCTATAGGA CACCCCATTT TAGGTGATGA TTTTTATGGT
TCTGAGCAAG TGATGAGTGC CGCGAAACGT TTGCAACTGC ATGCACAAAG CTTAAGCTTT
ACTCACCCTT ACTCAGGTAA AGCGATGCAC TTTAACAGTG TGCATCCATT CTAA
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| Protein sequence | MQIFSYKPPS IPWLDIRYLD RDIIVINKPS GLLSNPGIAE YTHDCALTRL QQRFKDCILV
HRLDCATSGI MVFARNKKAE SNLKTQFQDR QTQKTYIAEV DGIFKLQSGV IELSIAADKL
NPPKQMVSEL GKAAITHYKV LQQKPHSTLV ELKPVTGRTH QLRVHMLAIG HPILGDDFYG
SEQVMSAAKR LQLHAQSLSF THPYSGKAMH FNSVHPF
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