| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1462 |
|---|
| Symbol | |
|---|
| ID | 5661859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1783801 |
|---|
| End bp | 1785345 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641236050 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_001501322 |
|---|
| Protein GI | 157961288 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAA ATGGATTGCA GTCGCTTATC TTTTTAAGAA GTGTTTTTCT TTGGGCAGCT
ATTACTGTGC TAGTTGGCTG CCAATCTTCT CCTGTTTACC CCGATAAACC TATTACCACT
AAGCTAACCG CTCAAGCTGA GTGGCCGTTG GTTCAATATG TTCAAGCCGA TGTAGAAGCG
CACCCCGAGC AAACTGGTGT GCTGCCCCTC GCCGACGGTA TTGATGCCTT TATCGCACGT
CTCGCCTTAG TTAATGCCGC TACAGCCAGT ATCGATCTGC AGTACTACAT TTACCGTGGA
GATGATACTG GTAGATTATT AATTTGGCAT TTAATAGAGG CCGCTGACCG CGGTGTCAGA
GTCCGTATTC TGCTCGATGA TATGGCTGTT AAAGATGCCG ATGAAGCGCT AGTGATGCTT
GCTGAGCATG ACAATATTCA GGTGCGCTTA TATAACCCCT CGTTCGAGAG AGATTTTCGC
AACATCGCCT TCGTTGCAGG TTTTTCCAGA TTGAACCATC GCATGCACAA TAAGTCGTTA
ACGGTAGATA ACACCATTAG CGTGGTAGGA GGGCGTAATA TTGGCAATGA GTATTTTTCA
AATGATACAG ATGTTGAATT TGGCGATTTT GATTTAATGG CGATAGGAGG TGCCGTCGAT
GAGGTGTCTC AACAGTTTGA TCTGTATTGG AATGCACCAT TAACAGTAGA GATTAATGCG
CTGAGCTCCC ACAGTGTGAC AGCAGAAGAT ATCGCCGATG CCTTGGAAGC TGTTGAGTCA
GAAAAAGCAG ATTATCAATC TAATCCATAT ATAGCTCGTT TGCTAAATAG CCAATTGATA
AGTCAAATGC AGAATCATTC ATTGCATTGG TTCTGGGGGC CTGCAAAGCT GGTTTATGAT
CTGCCGGATA AGCAAAATCA TCAGTCTCAA GAAGACAATA TTCTCTCTGA TCTTGGGGAG
TATTTAGAGC TGGCAACAGA TGAAGTACTA ATTGTATCGC CTTACTTTGT ACCCACTCGA
ATAGGTACAA AAAGTATTGT TGAATCGGCT AAATCTGGGA TTGATATTAC TATATTGACT
AATAGCTTAG CTGCTACCGA TGTATTGGCT GTTCACGCTG GTTACCGGCA ATATCGCCAG
CCGTTATTGG AGGCCGGTGT AAAGATTTAT GAAGTGAAAG CTAACCCCAA GCAGAAGAAA
AACAGTAGTT GGAGCGGCAG CTCTAAGAGT AGCTTACATG CCAAAACGTT TGTCACAGAT
AGGTTATCAG TTTTTGTCGG GTCCTTTAAC TTCGATCCTC GGTCTGCATG GTTGAATACC
GAGATGGGGT TGATCATAGA TAACCAAGAG CTAGCAGCTG GTGTGGTCGA CGCGATAGAA
GCAAGCTTAG CAAAAAATAC CTATCGCTTA GGGATTGAGA GGGGGGAAAT CGTCTGGTTC
GATGATTTTA GTCAACGAAA AGTTTACACA GAGCCTGATG CAGGCCTGTG GCGAAAGTTT
CTAGTGGATT GCATCGCATT ATTGCCGATT GAGTCCCAGC TTTAA
|
|---|
| Protein sequence | MNANGLQSLI FLRSVFLWAA ITVLVGCQSS PVYPDKPITT KLTAQAEWPL VQYVQADVEA
HPEQTGVLPL ADGIDAFIAR LALVNAATAS IDLQYYIYRG DDTGRLLIWH LIEAADRGVR
VRILLDDMAV KDADEALVML AEHDNIQVRL YNPSFERDFR NIAFVAGFSR LNHRMHNKSL
TVDNTISVVG GRNIGNEYFS NDTDVEFGDF DLMAIGGAVD EVSQQFDLYW NAPLTVEINA
LSSHSVTAED IADALEAVES EKADYQSNPY IARLLNSQLI SQMQNHSLHW FWGPAKLVYD
LPDKQNHQSQ EDNILSDLGE YLELATDEVL IVSPYFVPTR IGTKSIVESA KSGIDITILT
NSLAATDVLA VHAGYRQYRQ PLLEAGVKIY EVKANPKQKK NSSWSGSSKS SLHAKTFVTD
RLSVFVGSFN FDPRSAWLNT EMGLIIDNQE LAAGVVDAIE ASLAKNTYRL GIERGEIVWF
DDFSQRKVYT EPDAGLWRKF LVDCIALLPI ESQL
|
|---|
| |