| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1460 |
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| Symbol | |
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| ID | 5661857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1781753 |
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| End bp | 1783081 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236048 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001501320 |
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| Protein GI | 157961286 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAGC CAGTATCTTC AACCGACCAA GTAGCAACGC AAACTGTAGC GGACACACAA
GCTCACAGTG ACTTTACCCA ACTAGGGCTA ATCCCTGAGT TGCTTGAAAC ACTTAAACTG
CTGAGTTATA CAAAGCCGAC AGCGATTCAA TCGCATATTA TTCCGGCGGT TTTGGACGGG
AAAGATGTGC TAGGCGGCGC TAAAACGGGT TCGGGTAAAA CAGCTGCTTT TGCTCTACCT
ATCATTCAAA AGCTTGCTAA GGCATCACCT CGTAAAGCGG GCGGTAATTT TGTCTCTTGT
TTGGTGTTAG TGCCTACTCG TGAGCTAGCA CAGCAAGTTG CCGACAGCTT TATGCGCTAT
TCGCAGTTGA TTAAACCTAA CCTAAAAACC CTTGCGGTTT ATGGTGGCGT GTCAACTAAT
GTGCAAATGC AAAGCTTACG TGGCGGCGCC GATATTGTTG TGGCTACACC GGGGCGTTTA
ATCGATCTGA TTTCAAGTAA TGCGCTTAAG CTAGATAACA CCACGACTTT GGTTTTGGAT
GAAGCCGATC GCATGTTGAG CCTAGGTTTT ACTGAAGAGC TGAACGAGCT TTTAGCTAAG
CTACCTAAAA CTAAGCAAAC CTTATTGTTC TCAGCCACTT TCCCTGAAGA AGTGCGCGAG
CTTACCGATT CGCTATTGAA TAACCCTGTA GAAGTACAGT TACAAAGTAG CGAAGAGAGC
ACACTGGTTC AACGCGTTAT TACCGTTAAT CGTAACCGTA AAACGGCTTT GTTAGCTCAA
TTGATTAAAG ATAATCAGTG GCAACAGGTG CTTATCTTTG CTAGCGCAAA ATATAGCTGT
AACCGTTTGG CGCAAAAATT AGAAAATGCA GGCATTACTG CCGAAGTATT TCATAGTGAT
AAAGGGCAGG GTGCCCGTAA CCGTGTACTT GAGGAGTTCA AGTCAGGCGA AATAAGCGTG
CTTATCGCGA CGGATATCGC TGCCCGTGGT ATCGATATTG AAAAACTACC AATAGTGATT
AACTTCGAAT TACCTAGAAG TCCTGTTGAT TATATGCACC GTATCGGTCG AAGCGGTCGT
GCGGGTGAAG CGGGCTTAGC AATGAGCTTG ATTTCTCACG ATGAATATCA GCACTTTAAG
TTGATCGAGA AGAAAAATAA GCTGAGATTA GAGCGCGAGC AGATCCCTGG CTTTGAAGCC
GATCTTGAAG CGCCAGAAGA CTGCCCATCA CGTGAAGTTA AGCCGATGGC AAAGCCTGCT
GGCACGGGGA AAAAACACCG TAATAAATTA CCGAAAGCCA ATGCCGAACT TTGGGGCAAG
AAGTCTTAA
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| Protein sequence | MTQPVSSTDQ VATQTVADTQ AHSDFTQLGL IPELLETLKL LSYTKPTAIQ SHIIPAVLDG
KDVLGGAKTG SGKTAAFALP IIQKLAKASP RKAGGNFVSC LVLVPTRELA QQVADSFMRY
SQLIKPNLKT LAVYGGVSTN VQMQSLRGGA DIVVATPGRL IDLISSNALK LDNTTTLVLD
EADRMLSLGF TEELNELLAK LPKTKQTLLF SATFPEEVRE LTDSLLNNPV EVQLQSSEES
TLVQRVITVN RNRKTALLAQ LIKDNQWQQV LIFASAKYSC NRLAQKLENA GITAEVFHSD
KGQGARNRVL EEFKSGEISV LIATDIAARG IDIEKLPIVI NFELPRSPVD YMHRIGRSGR
AGEAGLAMSL ISHDEYQHFK LIEKKNKLRL EREQIPGFEA DLEAPEDCPS REVKPMAKPA
GTGKKHRNKL PKANAELWGK KS
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