| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1458 |
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| Symbol | |
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| ID | 5661855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1779534 |
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| End bp | 1781048 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236046 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001501318 |
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| Protein GI | 157961284 |
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| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGTTC AAGAGTGCCA GCTTGATAAA GACGCTTGCC GTAAAGCAAG GCTTGCTCGA
GATCCGCGAT TTGACGGCCA GTTTTTTATT GGCGTGCTTA CAACTAAAAT TTATTGCAGA
CCAATATGCC CGGCAGTCAG TCCGAAAGAG CAAAATGTTC GCTATTTTGA TAATGCGATA
CAAGCTGCAA ATGCCGGACT ACGCCCGTGT TTACGTTGCC GACCAGATTC AGCCCCCAAG
TCTTATGCAT GGCAAGGCAC ACAAACTACC TTAGACAGAG CTAAAGCATT AATTGATGCA
GGCACGTTGT CAGGCACAGA AGGGCAGAGT GTAGAAGCCT TATCTGAACG TCTTGGGATA
AGTAGTCGCT ACTTGCGTAG ACTGTTTAAC GATAAAATGG GGATTTCCGT AAAAGGGTAT
AACCAGTATC GACAACTTCT GCTTGCGAAA CAGTTATTAC ATCAGACTGA GTTACCAATC
ACCCAAGTGG CATTTGCGGC TGGCTTTACT AGTATTCGAC GCTTTAATGA AGCTTTCCAG
CAAACATTGC AGCTAACCCC ATCAGAATTA CGAAAAGAAA ATGCTAAGCC TAATAGGGAA
CATCGAGTAA GTACTGAGCT AACACCTAAT AGCACCAACC AGAATAAAGG GTTAGTGGCG
TTGAAACTAC AGATGAGTTT CAGGCCACCT TTTTCATGGG CTAAGCAGCA TCATTTTTAT
CAGGTGCGTG CCGTCACTCA TATGGAGTGG CTAGCTGATG AACTTAGCTA TGGTCGTAGC
TTTACGATTA ACGGGGTAAG TGGTTATTTT TCCGCAAAGC TCGATGCTAG CAAGCATCAG
TTTAACGTCG AGATTGTACT CGAGAATGAA TCTGGGCTGG TGCAGCTTAG TGCAGTCATT
AATGGCATTC GCCGAGTGTT GGATCTTGAT GCCAATATTA GTCAGATTGA CAATGTGCTC
GAAACCATTA CACCCCTAGC AGGACAAATG ACTCAAGGGC TGAGACTACC TGGTGTTTGG
TCTGTGTTTG AGGCTGGCTG CAGGGCGGTT TTAGGTCAGC AAGTCAGTAT TGTACAAGCT
TCGAAGTTAC TTAATCAGTT AGTGCTCGCT TATGGTGAAG AGCGCCTTAT TGGTGACAAA
CGTGTTAAGT TATTTCCAAC GCCAGAAGTG ATAGCCAAAG CGGAACTGAC AGAGTTAAAA
ATCCCTGGTG CTAGAAGAAA CGCCCTTAAT GCGTTAGCTC AATTTGTCTA TGAGCATCCG
GATGCAGTAC CTGATTCATG GCTCACAATC AAAGGTATAG GGCCGTGGAC TATTGCCTAT
GCAAAAATGC GTGGATTGAG CGATCCCAAT ATTCTGTTGT GCGGCGATCT TGTCGTGAAA
AAGCGAGTGT TGGCCTTATA TTCTGAGCAT AGTGAAAATA GTGGTAGTGA TTACTCAGCC
ATTAGCCAAA AGCTCGCTCA AATTAGTACC CCTTGGGGGA GCTATTTAAC TTTTCAGTTG
TGGAACTTGT CATGA
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| Protein sequence | MLVQECQLDK DACRKARLAR DPRFDGQFFI GVLTTKIYCR PICPAVSPKE QNVRYFDNAI
QAANAGLRPC LRCRPDSAPK SYAWQGTQTT LDRAKALIDA GTLSGTEGQS VEALSERLGI
SSRYLRRLFN DKMGISVKGY NQYRQLLLAK QLLHQTELPI TQVAFAAGFT SIRRFNEAFQ
QTLQLTPSEL RKENAKPNRE HRVSTELTPN STNQNKGLVA LKLQMSFRPP FSWAKQHHFY
QVRAVTHMEW LADELSYGRS FTINGVSGYF SAKLDASKHQ FNVEIVLENE SGLVQLSAVI
NGIRRVLDLD ANISQIDNVL ETITPLAGQM TQGLRLPGVW SVFEAGCRAV LGQQVSIVQA
SKLLNQLVLA YGEERLIGDK RVKLFPTPEV IAKAELTELK IPGARRNALN ALAQFVYEHP
DAVPDSWLTI KGIGPWTIAY AKMRGLSDPN ILLCGDLVVK KRVLALYSEH SENSGSDYSA
ISQKLAQIST PWGSYLTFQL WNLS
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