| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1454 |
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| Symbol | |
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| ID | 5661851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1768643 |
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| End bp | 1769872 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236016 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001501314 |
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| Protein GI | 157961280 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0344021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCC GCAGTCAGGC GAAACAAGAC GGCAGTGAAA TCCGCTTAAT CATTGGCTTA
TCTATTGCCT CAATGGTTAT TTTTATTAAC TTGTACCTAG TCCAAGGCAT GCTGCCGCTT
ATTGCGGACT CTTTTTCTGT ATCAAAAAGT CATGCAACAC TCTTGTTGTC GGTAACCAGC
TTTACCATGG CGTTCTCACT GTTACTATTT GCGGTGTTGT CCGATCGAGT TGGTCGTAAA
AAGCCAATTC TAGTCAGCTT ATACCTGTTA GTTATTCTCG ATTTTTGTGC ATTTTTTATT
ACTGAGTTTA ACCAGCTAAT TTTACTGAGA ATGCTACAGG GAGCTTTGCT CGCATCAGTA
CCTGCTATGG CGATGGCTTA TTTTAAAGAT GAGCTCGGTA ATAATGCATT ATTGAAAGCT
GGTGCAATCT ATATTGCCGC TAACAGTGTT GGTGGGATAG CCGGACGCTT GCTAGGTGGT
GGCATGGCGC AGTATTTAGA TTGGCAGCAA GCGATGGCAC TACTTACCCT AGTGTCATTA
ATTGGGACAC TTGTTGTGAC TTATTTGCTA CCAAAGAGCC ATTTTGTAAA ACCAGAGGCT
GAACTCGGTA GGTGGCCGCT GAAGAAAGCT GACTTTAACG GTTTTTGCCA CCATCTAGCG
GATCCTAAAT TACGGCTTAT TTACCTTATT GGCGGCTTGG CCTTTATGGT GATGGTAAAT
CAGTTTAGTT ATATTCAGCT GCACTTGATG GATAATCCTT TTAAGTTAGG CCGCTTTGAA
GTGACACTCA TTTTCCTTTG TTACCTCAGC GGGACCTATG CTTCTTATTG TTCGGCTAAA
TGGCTCGGAA GATTTGGACT CAATAAAGTC TTTATCTGCT CGGTGTCGGC GTTACTTGCT
GGAACCTTGC TTACCTTATT CGATACTTTA GCGGCAATCT TTGCTGGTTT TTTACTTTCA
GCATTTGGCT TCTTCTTAAT TCATAGTAGC TGTAACGCTT GGGTAGCCTA TAGAGCTAAA
CAGCATCGCG CTAAAGCCAC GGCACTGTAT CTGTGTAGCT ATTACTTAGG CGCTGCGATG
GGGGGGCCTT ATTTACTGCC ATTTTGGCTG GTATGGGGTT GGCAAGGCGT AGTGCTAGGA
TCTGTACTTG GATTAATGGT GTTGGTATTC GTCGTATTTA AGCTTGTCCA ACCTAAGTCG
GCATCAAGTT CATTATTGAT GGATCTGTAA
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| Protein sequence | MNTRSQAKQD GSEIRLIIGL SIASMVIFIN LYLVQGMLPL IADSFSVSKS HATLLLSVTS
FTMAFSLLLF AVLSDRVGRK KPILVSLYLL VILDFCAFFI TEFNQLILLR MLQGALLASV
PAMAMAYFKD ELGNNALLKA GAIYIAANSV GGIAGRLLGG GMAQYLDWQQ AMALLTLVSL
IGTLVVTYLL PKSHFVKPEA ELGRWPLKKA DFNGFCHHLA DPKLRLIYLI GGLAFMVMVN
QFSYIQLHLM DNPFKLGRFE VTLIFLCYLS GTYASYCSAK WLGRFGLNKV FICSVSALLA
GTLLTLFDTL AAIFAGFLLS AFGFFLIHSS CNAWVAYRAK QHRAKATALY LCSYYLGAAM
GGPYLLPFWL VWGWQGVVLG SVLGLMVLVF VVFKLVQPKS ASSSLLMDL
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