| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1453 |
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| Symbol | |
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| ID | 5661850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1767553 |
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| End bp | 1768434 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641236015 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001501313 |
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| Protein GI | 157961279 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.248466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA AACAGCTAAA ATACTTAGAT GCCTTAATTA CAGCGGGTAG CTTCACTAAA
GCCGCCGAGC GGCTCAATAT GGCGCAGCCA GCGTTGAGTC AAAGCATTAA GCGCTTAGAG
CAGGAGCTCG GCGTCACCCT AGTTGATAGA GGGGCGAATA AAAGCAGTAA AACACTTTCG
CTAACTGCTG AAGGCAGCGC TCTACATCAG CATGCCAAGC TGATAATCAA AAATATGGCG
CAAGCTGAAG CGCACATAAA ATCGATGGCA AACCTGACGA TGGGCGAAGT CAGAGTTGCA
GTGCCTGGTA TGCTAGGGTC TTATTATCTA CCTAGGCGAT TAATGGCATT TCGCCACCAA
CATTCAGAAC TTAAATTATC CCTGTTTGAA GGCGGTACTC GAGACACCCT CAGAATGCTA
CAGAATGAAG ATGTCGATAT CGCCATCATT ACCGCCAACG ATCTGACCGA TGAGTTTGAC
AGTCACCTAC TACTGCAGGA GCAGATGGTC GTCGCAGTGG GTAAAGAACA CCCTTTAGCC
AAATTAGATA CGGTGACGCT TCAAGCGTTT TTCCAGCATG AACTGGTATT CTTTAAACCG
GGTTACTTTC ACCGTGATTG GATGCTTGAA CAGGCGGAGA AATTAGGCCT TAAGGCAAAT
ATCGCCTTTG AAACCAACCT GATTAATCTC ATTAAACAAG TTGTTGCACA GGAGTATGGA
ATAACCAGTG TGCTTGAAAT GGTGATAGAA AAACACGACA ACATTTGCGC CAAGCCCTTC
AACCCACCTA TCTTTTTGGA TTTGCATATT GCTTGGAAGA AACAACGCCC TATCAGTCAA
GCCGACAAGG CGTTCGTTGA GTTTCTGATG CAAAACCGTT AG
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| Protein sequence | MDIKQLKYLD ALITAGSFTK AAERLNMAQP ALSQSIKRLE QELGVTLVDR GANKSSKTLS
LTAEGSALHQ HAKLIIKNMA QAEAHIKSMA NLTMGEVRVA VPGMLGSYYL PRRLMAFRHQ
HSELKLSLFE GGTRDTLRML QNEDVDIAII TANDLTDEFD SHLLLQEQMV VAVGKEHPLA
KLDTVTLQAF FQHELVFFKP GYFHRDWMLE QAEKLGLKAN IAFETNLINL IKQVVAQEYG
ITSVLEMVIE KHDNICAKPF NPPIFLDLHI AWKKQRPISQ ADKAFVEFLM QNR
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