Gene Spea_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1452 
Symbol 
ID5661849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1766811 
End bp1767461 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content45% 
IMG OID641236014 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001501312 
Protein GI157961278 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0577899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTT ATGGTTATTG GCGCTCCAGC GCCGCTTATC GCGTGCGGAT CGCGATGAAT 
CTTAAGTCGC TTGCAGCCGA ACAAGTTTCA GTACACTTGG TGAAAGATGG TGGTGAGCAG 
CATAGTCGCG AGTATCAACA GATAAATACT CAAGAGTTGG TACCAAGCTT AATGATTGAC 
GACAATGGCC AGCAGCGCGT GTTAACGCAG TCATTGGCAA TAATCGAGTA CATGGAGGAG 
GTTTATCCTG AGGTTGCCTT ACTGCCTAGT GCGCCATTTG ATAAGTCGAT AGTGCGTGCG 
ATGGCATTAA CGGTTGCGTG TGAGGTTCAT CCGCTAAATA ACTTAAAAGT ACTACAGTAT 
TTGGCGAATG AACTCGATAC TACAGATGAA AAGAAAGCGG CCTGGTACCA TCATTGGGTT 
CAAGAAGGTT TTAGCGCATT AGAAAAGCAA TTAGAGCAGC ATAGCGGGCT TTTCTGCTTT 
GGTGATACCC CAAGTCTTGC CGACATCTGT TTAGTGCCTC AGGTGTATAA TGCTAAGCGT 
TTTAAGGTCG ATATGAGCCC ATATCCAAAT ATTGAGCGCA TAAACGTACA CTGTTTGACT 
CAACAAGCCT TTATTGATGC GATACCAGAA AACCAACTGG ATGCCAGCTA G
 
Protein sequence
MKLYGYWRSS AAYRVRIAMN LKSLAAEQVS VHLVKDGGEQ HSREYQQINT QELVPSLMID 
DNGQQRVLTQ SLAIIEYMEE VYPEVALLPS APFDKSIVRA MALTVACEVH PLNNLKVLQY 
LANELDTTDE KKAAWYHHWV QEGFSALEKQ LEQHSGLFCF GDTPSLADIC LVPQVYNAKR 
FKVDMSPYPN IERINVHCLT QQAFIDAIPE NQLDAS