Gene Spea_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1443 
Symbol 
ID5661840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1757890 
End bp1758564 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID641236005 
Producthypothetical protein 
Protein accessionYP_001501303 
Protein GI157961269 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000382578 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATAAATG AAGCTGTTCT GATCCGCCCC ATCATTAAAC GCAATGGATT AACACTGACC 
TTTGCTGGTG GCCTAGGTTT AGCCACAGGA TTAGGGCTCT TCTTATCGGG GAGTCATCTA 
TTTGCACCAG GAATTATTTG TTTTGCATCT GGCGCAATCG CACTGGTTCT CGGGGGAGCT 
AAATTGGTTG AGCCTGAGGT GACGGTTAAA CTGACTGACG AGGGGCTGAC GTATTTTCAT 
CGCCGTGGTC AGGTTGTAAT TGAATGGCAG AATATTCAAC GTTTTGATCA GCCGCGAGTG 
TCTCAGGGGC TTGATACCCT GAATCTGCCT TATATTGGGA TTAAGTTAAA ACAGGTTAGC 
CCTGTTTTAG AGTGTATTTC ACTGCGGTTA GCTGCGGGCT TATTAACTGA GCAGCGTCCT 
TTACTGATGA CGGCTTCAGT TCAAGATGAA GACCTATCTG TATTAGAGGA TCAGATGAGT 
GCAGAGTTTT CGCCTTTTAT TGAAAACGAT GACCGATATA AGGGCGTGCT AGCGATGTTT 
GGTCACCGTT GTCGGCTATT GAATTCACAC TTAGGCTATC ACCTGTTCAT TTCAACAGAT 
GCACTGGATA GGTCAGAAAT TGAGTTTCTC GCTCTACTGA GAGAGTATAA AAAGCAAAGT 
GTAGAGCAGT TGTAG
 
Protein sequence
MINEAVLIRP IIKRNGLTLT FAGGLGLATG LGLFLSGSHL FAPGIICFAS GAIALVLGGA 
KLVEPEVTVK LTDEGLTYFH RRGQVVIEWQ NIQRFDQPRV SQGLDTLNLP YIGIKLKQVS 
PVLECISLRL AAGLLTEQRP LLMTASVQDE DLSVLEDQMS AEFSPFIEND DRYKGVLAMF 
GHRCRLLNSH LGYHLFISTD ALDRSEIEFL ALLREYKKQS VEQL