| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1441 |
|---|
| Symbol | |
|---|
| ID | 5661838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1755727 |
|---|
| End bp | 1756632 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641236003 |
|---|
| Product | fructokinase |
|---|
| Protein accession | YP_001501301 |
|---|
| Protein GI | 157961267 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0134154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGGA TTGGTGTTGA TCTTGGTGGT TCAAAAATTG AAGTTGTAGC ACTTAACGAG
CAGGGCACAG AGCTATTTCG TAAACGTCTT CAGACACCAA GAGAATATAA TGCAACGCTT
GATGCGATAG AGGCTCTAGT GACTGAAGCC GAACTGCAAT TAGGGCAAAA AGGCACTGTG
GGCGTTGGGA TCCCCGGCGT TGTGTCGCCA TTTTCAGGTT TAGTTAAAAA TGCCAATTCC
ACCTGGATTA ACGGTCACCC ACTCGATATC GATTTAGGTC GGCGTTTAAA CAGAGAAGTC
AGAGTGGCAA ACGATGCCAA TTGCTTTGCG GTCTCAGAGG CTATCGATGG TGCCGCGGCC
GGAAAAACCG TGGTTTTTGG GGTGATTATA GGTACTGGAT GCGGGGCTGG CATTGCCATT
AACGGTAAAG TACATGGCGG TGGCAATGGT ATTGGTGGTG AGTGGGGGCA TAATCCTTTG
CCTTGGATGA CCCCAGATGA GTTCAACTCA ACCAGTTGTT TCTGCGGTAA TAAAGATTGC
ATTGAGACTT TTATTTCTGG TACTGGTTTT GTGAGGGACT ATCAACTTGC AGGGGGGCTC
GCGACAAATG GTGCTGAGAT AGTTTCGTCT ATGCAAGAAG GTGATGTTAT AGCTTGTGCT
GCATTTGAGC GTTATGTCGA TAGGTTGGCC CGTTCACTCG CTCATGTTAT CAATGTGCTG
GATCCTGACA TAATTGTGCT TGGCGGCGGC GTCTCGAATA TTGAGGCTAT TTACCCGTTA
TTGCCTGACT TCTTACCTAA ATATGTATTG GGCGGAGAGT GTCGAACCCC TGTAGTGCAA
AACATGTATG GTAGCGCTTC AGGCGTACGC GGAGCAGCTT GGTTGTGGAG TAAAGATGAG
ACTTAG
|
|---|
| Protein sequence | MLRIGVDLGG SKIEVVALNE QGTELFRKRL QTPREYNATL DAIEALVTEA ELQLGQKGTV
GVGIPGVVSP FSGLVKNANS TWINGHPLDI DLGRRLNREV RVANDANCFA VSEAIDGAAA
GKTVVFGVII GTGCGAGIAI NGKVHGGGNG IGGEWGHNPL PWMTPDEFNS TSCFCGNKDC
IETFISGTGF VRDYQLAGGL ATNGAEIVSS MQEGDVIACA AFERYVDRLA RSLAHVINVL
DPDIIVLGGG VSNIEAIYPL LPDFLPKYVL GGECRTPVVQ NMYGSASGVR GAAWLWSKDE
T
|
|---|
| |