Gene Spea_1437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1437 
Symbol 
ID5661834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1748985 
End bp1750076 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID641235999 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_001501297 
Protein GI157961263 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATTC TTATCACAGG AGCCGCAGGT CAACTTGGAC AGGCATTGCT ATCGATAGCG 
GGGCTTACAC AGGTTAATTT GGCAGAGCGA ACCGTCGCTC AGCAAATGCT GGTGGCTTTG 
TTACCCGAAG CGTTAGAGTG CATCGAAACA ACAGATGAAG TGATTGGTGT TTCTCATCAA 
GCGCTCGATA TTTGCGATAT AGATTCAATA CGTAAAGCAT TCGATACTAT AGCTCCCGAT 
GTTGTGATTA ACTGCGCCGC CTATAACGCA GTTGATAAGG CTGAGTTTGA TATCGACAAG 
GCAATGCTTA TTAATGCCGA AGGGCCTAAA TTACTCGCCG GTGAGTGTCA GCGCCACAAT 
ATAAGACTCG TGCATATCTC AACTGACTTT GTGTTCGATG GTGAGTTATT ACGTGCATAC 
ACAGAGCAAG ATAGCCCCGC GCCGCTGTCG GTTTATGGCA AGAGTAAGCT AGAAGGGGAG 
CGCTGGGTCA GTGATATCTT GGGCTCAAAG GCAACGATTA TTCGTACCTC TTGGCTCTAC 
AGTTGTTATG GCCATAATTT TGTTAAAACC ATGCAGAGTT TGTTTAAGGT CAAAGAGAGC 
CTGTCGGTAA TAAACGATCA ATATGGTAGC CCTACTTGGT GTGAAGCCTT AGCCGTAGCA 
ATTTTTATGC TCGTAAAGCA AACTCAGGCG ACAATTTTGA CTCGCCCGTC AGTATGCGAG 
GATAAACCCG CTAAAGGCTT AGCTGATTTA TACCACTATG CTGCTAGTGC TAGCGCTTCA 
TGGTATGAGT TTGCCTGTGA AATTCAACGT CAGGCAGGCT CTGTCACAGA GCTCGCACCA 
AGCACAAAAT TATCACAAAA CAAAGAATTC GCACCAAACA GTGCTGATTG TTCAATACTG 
CCCATTACGA CTAAAGCTTG GCAAGAGTTA CATGATAACC GATTAGCATT AAGGCCAAAG 
CAAAGTGCTT TGAATACGCA AAAGTTGTGT CATCAGTTAG CTATCGAGCC GGGGAGTCTA 
CTCACTGCAA CTTGGCAGCA ACAGTTAGCA GCCATGGTTA GCTATCAAAA GGTTAAAAGC 
CGGGAAAGCT GA
 
Protein sequence
MRILITGAAG QLGQALLSIA GLTQVNLAER TVAQQMLVAL LPEALECIET TDEVIGVSHQ 
ALDICDIDSI RKAFDTIAPD VVINCAAYNA VDKAEFDIDK AMLINAEGPK LLAGECQRHN 
IRLVHISTDF VFDGELLRAY TEQDSPAPLS VYGKSKLEGE RWVSDILGSK ATIIRTSWLY 
SCYGHNFVKT MQSLFKVKES LSVINDQYGS PTWCEALAVA IFMLVKQTQA TILTRPSVCE 
DKPAKGLADL YHYAASASAS WYEFACEIQR QAGSVTELAP STKLSQNKEF APNSADCSIL 
PITTKAWQEL HDNRLALRPK QSALNTQKLC HQLAIEPGSL LTATWQQQLA AMVSYQKVKS 
RES