Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1436 |
Symbol | |
ID | 5661833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1748151 |
End bp | 1748933 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641235998 |
Product | putative hydrolase |
Protein accession | YP_001501296 |
Protein GI | 157961262 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1387] Histidinol phosphatase and related hydrolases of the PHP family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTCAAA CTTTTTGTAA TGAAGAGACC GCCATGAAAT ATCTTGTTGA TACCCATACT CATACGATTG CTTCGACCCA TGCTTATAGT ACGTTGCAAG AATATATTGC GATGGCCAAG CATAAAGGCA TTAAGTTATT TGCCACTACC GACCATGGGC CCGATATGGC CGACGCCCCC CACTTTTGGC ATTTTGTGAA CTTACGAGTA TTACCACGAA TTGTTGATGG CGTGGGCATT TTACGAGGCA TCGAAGCCAA TATTAAAAAT GTGGTCGGAG AGATAGACTT CTTTGGTGAT TACCTGCAAG AGTTAGATAT TGTTCTCGCC GGTTTTCATG AACCCGTTTT TGCGCCAAGC AATAAAGAAA CTCATACTGC TGCACTTATA AACTGTATCA TGAGTGGTCA TGTCGATATC ATTACTCATC CAGGCAACCC AGCTTACCCA ATAGACATTG CTGCCGTTGC CAAGGCAGCC GCCGAGAATA ATGTCGCCCT TGAGATCAAT AACTCCTCTT TTTTAACTTC TCGAAAAGGC AGTGAACATA ACTGTTTGGC CATTGCCAAG GCGGTTAAAG AGGCGGGCGG GCTATTGGTG ATGGGCTCTG ATTCTCACGT GGCATACAGC CTAGGAGATT TCACTCAGGC CGAGCAGATT ATCGAGCAAG CCGATTTTCC CATTGAGCGT TTGCTCAACC GTAGCCCCGA GGCTTTACTG GCATTTTTGT CAGCAAGAGG CCATGGCTCG CTCGATGAAT ATTCGGCGCT ACTCGAAAAC TAA
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Protein sequence | MFQTFCNEET AMKYLVDTHT HTIASTHAYS TLQEYIAMAK HKGIKLFATT DHGPDMADAP HFWHFVNLRV LPRIVDGVGI LRGIEANIKN VVGEIDFFGD YLQELDIVLA GFHEPVFAPS NKETHTAALI NCIMSGHVDI ITHPGNPAYP IDIAAVAKAA AENNVALEIN NSSFLTSRKG SEHNCLAIAK AVKEAGGLLV MGSDSHVAYS LGDFTQAEQI IEQADFPIER LLNRSPEALL AFLSARGHGS LDEYSALLEN
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