| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1435 |
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| Symbol | |
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| ID | 5661832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1746558 |
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| End bp | 1748054 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235997 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001501295 |
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| Protein GI | 157961261 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAG CAAGCTCATT TACCACCTTG CTCGTCGAAG ACAGTATGTC TCTCGGGGCG
CTTTATACAG AATACCTTCG CACGGAGGGG GCGCGAGTCA CTCATGTTAA TCATGGGAGT
GATGCGTTGA ATGAGCTTAA ACGCTGGCAA CCGGATCTAT TAGTGCTCGA TATTCAGCTA
CCAGATATGT CTGGGATGGA TATTTTGGAG ATCGTACAGT CAGAGTACCC AGATGTTACC
GTCATAATGA TCACTGCCCA CGGCAGCATT GATATCGCTG TCGATGCCAT GCGCTCGGGG
GCGTTTGATT TTCTTATTAA ACCTTTCGAT GCAAAACGTT TATCCATTAC CGTACGTAAT
GCATTAAAAC AGCGTCAGCT TGTTAATCTT GTCGCCAAGT ACGAGAGTAG CCTGCCTAAG
CCACATTATA TGGGGTTCAT TGGAGAGTCG TTGGCGATGC AAACCGTATA TAAAACTATC
GATTGTGTAG CGAGCAGCAA AGCTTCGGCC TTTATCATTG GTGAAAGTGG TACGGGTAAA
GAGGTGTGTG CTCATGCGAT ACACAATGCG GGTAACCGTA GCGATGGGCC ATTTGTGGCT
TTAAACTGTG CGTCAATCCC AAAGGATTTG ATTGAAAGTG AGATTTTTGG TCACACCAAA
GGGGCGTTTA CTGGCGCGAT AGCCAATAGA GATGGCGCGG CGACACGGGC GCATAAGGGC
ACGCTTTTTC TTGATGAGAT CTGCGAGATG GATTTGGAGC TGCAGAGTAA GCTACTGCGC
TTTATTCAAA CCGGTGTGTT TCAACGTGTT GGGGCTACAA AAGAAGAAAA GGTCGATGTA
CGCTTTGTCA GTGCGACTAA CCGTATGCCT TGGGATGAAG TTAAAGCGGG GCGTTTTAGA
GAGGATCTAT TCTACCGTTT ACATGTGATC CCAATTGAGC TGCCGCCGCT GAGAATGCGC
GGCAAAGATA TTTTGCTGCT GGCATCCTCT TTACTCAAAG AGTACAACAA AGAAGAGGGT
AAGACGTTTA AGGGATTTAG CCCTGAAGCT AAGCAATGCT TAAAGTCTTA CCCATGGCCC
GGTAATGTTA GGCAATTACA GAACGTTATT AGGCAGATAG TGGTATTGAA TGACAGCGAA
ACGATTGAGA TTGATATGTT ACCAATACAG CTGACATCGA CTTCAGCGAT TAAATCTGAA
GTCGCTAAGC CACAGGCGGC GGTTGTTAAG TCTCAGTCTC TCCGAGGTGA CTCTGACGCC
TCCTCTTTTC TTGATGGAAT AGAGCGCGCG GCTTTTTCTG GTTCCGAGCA ATATGCTAAA
TCTGCCAATG AAAAAAGTGA TGATATTGTA CCGCTATGGA AGACAGAGAA GCAGACCATT
GAAAATGCTA TAGCACGTTG TGATGGCAAT GTGCCTAAGG CCGCAGCATT ATTGGATATC
AGTGCATCGA CTATCTATCG AAAACGCCAG TCATGGGATG AGTTAGAAAA AGCTTAA
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| Protein sequence | MDIASSFTTL LVEDSMSLGA LYTEYLRTEG ARVTHVNHGS DALNELKRWQ PDLLVLDIQL
PDMSGMDILE IVQSEYPDVT VIMITAHGSI DIAVDAMRSG AFDFLIKPFD AKRLSITVRN
ALKQRQLVNL VAKYESSLPK PHYMGFIGES LAMQTVYKTI DCVASSKASA FIIGESGTGK
EVCAHAIHNA GNRSDGPFVA LNCASIPKDL IESEIFGHTK GAFTGAIANR DGAATRAHKG
TLFLDEICEM DLELQSKLLR FIQTGVFQRV GATKEEKVDV RFVSATNRMP WDEVKAGRFR
EDLFYRLHVI PIELPPLRMR GKDILLLASS LLKEYNKEEG KTFKGFSPEA KQCLKSYPWP
GNVRQLQNVI RQIVVLNDSE TIEIDMLPIQ LTSTSAIKSE VAKPQAAVVK SQSLRGDSDA
SSFLDGIERA AFSGSEQYAK SANEKSDDIV PLWKTEKQTI ENAIARCDGN VPKAAALLDI
SASTIYRKRQ SWDELEKA
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