| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1434 |
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| Symbol | |
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| ID | 5661831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1742889 |
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| End bp | 1746449 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235996 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001501294 |
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| Protein GI | 157961260 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCATTTC GGATAAAGAC GATCCTCGGG ATTGCTGTCA TCGAAGGTGT GCTGCTAATG
CTGCTGGTGT ATACCAGTGT CGATTATTTG AAAACCTCGA ATCAAGCAGA GATCGAAAAA
CGTGCCAGCT CTACCGCTTC TCTATTTGCT GCGGCTGCAA AGGATGCGGT GATCAGTACC
GACCTATCAA CCCTAAATGT GCTTGCTAAT GAGCTGTTAA CGACTTCCCA GGTCCTCTAT
GTCAATATTT ACGATCAAAG CCGATTATTG GTCAGTGTCG GTAGCATTAA CGGCGGCTCA
GTCGCCTCGT TAGATAGCGG CATTGGCAAT GTTGATGACG GTATCTTAGA CATTGAAAGG
GATGTACAAG AGTCGGGCTT TACCTATGGC AAGGTTGAGC TGGGTTTTGA TACCGCGGCG
CTAGATAGTT TTATTACCGA TGCCAGAACA CGTTTCCTGA CCATTGCGGG TATCGAGATG
TTTTTGGTGG CGCTGTTCTC TTGGCTATTA GGCCACTATT TGACCCGCAA TTTGGCGCTG
CTAAAGAGCG CATCTCAACG AATTTTACAA GGAGAATCTA AAGTTCAGAT CCCCGTCAGT
AGTGATGATG AGATAGGTAA AACCATGTTG GCGTTTAATC AAATGGTTAA AAAAGTCGCC
GACAAGAATC AGGCCTTAGT GAGTGCCAAT GTTCGACTCA ATGCCATATT ACAGACTGCT
GTAGATGGCT TTGTGGTCGT TGATACTCAG GGTGTCATTG AAGAGGTTAA CCCAGCAGTT
AGTCGCCTGT TTGGTTACAG TCCCTCAGAA CTGATAGGGC GAAATGTTTC ATTATTGATG
CCATCGAATG AACGCAATAT GCATGATGAA TATATTCAGC ACTACCTAAA AAGTGCAGAT
GATAAAACAG TAGGCAAAGG ACGCGAGCTG TTAGCACAGA AAAAAGATGG CAGCCTGTTC
TCTATTGAGC TGTCTATATC AAAAATGCGT ATCGATGATG AGGTGCTTTT CTTAGGCTTA
GTGAAGGACT TAAGTGATGT AAAGTGTGCT CAGGCAGCGG CTCAAAGAAC GGAGTCTATT
TTATTGGCAA CTCTTGAAGG CAGTAAAGAT GCGTTAGTGA CGATAGATAC GAGTGGTGCC
ATTCAAGAAG TGAATGACGC TGCATGTTTG CTGTTTAAGT TTCACTCTGA ACAGATGATA
GGCCAACGAT TAGAAGAGGT GCTCTTTAGA GCTGATGAGA GGGATTGTTT TCATAATATC
TTAGAAGAGT ACCGTGCGAC AGGCGAAGGG TTAGCGGTTA AACATTCTAC TCAGATGAAA
GCGACTCGCT CCGATGGTGA GAAGGTGGCC ATTGAGCTGA CGCTCATTCC TGTACAGTTA
GGGCAAGAAA TGTTGCTGAC GGCATTTATT CGAGATATTT CACGTCGGAT GGAATACGAA
ACTCAATTGA AATTGGCAAA AGAGCAAGCA GAGCAGGGCA GCGAGGCTAA ATCTCGTTTT
CTCGCGACCA TGAGCCATGA GATCCGCTCT CCCCTCAATG CCGTGTTAGG GAGCGTCGAA
TTAATATTGG AGTCGACACT AAACAAAGAG CAGCGAATAT ATGCTGATAC TGCCAAAGAG
GCCGGTACGG CCCTGTTGAG TACAATTAAT GACATTCTGG ACTTTTCTAA AATTGAAGCG
GGGCAAATAG TGCTAGAAGA GAGTGCTTTC AGCCCTGCTA AGCTTGCCAC TCAAGTGCTA
CAAGTGTTAT CGCCCAAGGC GCAGGATAAA GGGATTGCAC TGGCGATTTA TGTTAATCGT
AATGTACCTG AGAGTTTGAT TGGAGACGGT CAAAGGCTTA GGCAGGTGCT GCATAACTTG
GTCGATAATG CGATTAAGTT TTCATTTGGT GGATGCGTTG CCATAGAGAT GTGGTTAGCA
GATGTTGATG AGGCACGGCT GTGTTGTAAG ATCTCAGATC AAGGTATTGG GATAAGTGAA
GAGTCTCAAT TGACATTATT TGAAGAGTTT AGTCAGGTAC ATGATACCCA TAATACCAAC
TACAGTGGTA CAGGACTTGG CTTGGCTATT TGTGCTGAGC TCATTGCTCA GATGGGGGGG
CACATAGGGG TTGATAGTCA GCAAGGTCAG GGAAGCTGCT TTAGTTTCGA CCTTTTGCTG
AAACGTGATG AAAAGGAGAA ACATAGTTAT GCGCCTTTGC CAATACACGC TAGGGTGCTC
CTTGTGCACC CAAATGCGAC CTATTGTAAG TTCATTAGCA GACAGTATAA GCAGTATGGT
GTGACAGCAA TTTGTGTCGA CAGCATCGAG GCGATTTTCA CGGCTTCGCA GGTACAAGGT
CGCTTTAATC TGGTGTTGAT TGATGAGCAC TGCCTATTGG AGCTAAACGC TATGCGCGTT
AATAGCGTCA AACAAGACTA TCTGCTCGAA GAGGGCATGA TGGCCGCATT AATGACGGTA
GTTGTACCTG AGGCTTCGGC ACAGTTAAGA GAGATAGGTT TAGAGCAGGT GATCAACAAA
CCTCTGAGCC GAGATATGAT GCTAGGCATG CTAAGAGGAG AGCATGAGTC ATCGGCTCAT
CAGGCTCAGG GTGAGCCTGT AGTGTCAACT TGTGATGAGC AACACTTGCC AATCTTGTTG
GCCGAGGATA GCCCTGCAAA TCAAATTGTT GCAAGTGCGT TGCTGAGTAA GGCCGGTTTT
AAGGTTGAGA TTGCTAATAA CGGGATTGAA GCATTGAAAA TGGCTAGCGC TAAAGACTAT
GGTTTGATCT TAATGGATAT GAGAATGCCC GAGATGGACG GTATTGAAGC CACGCAAAAG
ATATTACAGC GTAATCCATC TCAGGTTGTT ATCGCTATGA CTGCCAATGT GCAAAAAGAA
GACGTTGAGC AGTGCATGAA TGCAGGAATG AAAGCCTTTG TTCCTAAGCC TGTTAATCGA
GTGAACCTTG TTAATGTGGT AAATCAATGG ATTGTATCGG CCAAGGAAGA GGCTATAGTT
AGCTATAAAG CTATGGGGAA AGGTACAGAA GAGCCTTGTT CAGACAGTAA TAATGTTAAC
CATGATAATG GCGAGAGTAT CGATGACGAT AAGGTTGTGC CATTTATGCA AACTAAGAGA
AAAAGCAAAG TGAGCGCTTT CAATGGGACT AAAGCGCCAT TACAAACAAG TTCTCAGGGG
AGTGAGGAGC TGGTGACTAT CATAGATGAG GCTGTACTTG ACGAGTTAAC GGATATGTTA
GGTGGGGAAG CAATAGATAG AATGATGAGC GTTTTCTTGA CCGAGGCGCA AGAACGGCTG
AGCATATTGC AGCTCTTGCT TTTGGAATAT CAAAATGGAA ATGGACTCGA TTTGTCTGAG
ATTGATATTC AGGCCCATAC ACTTAAGAGC AGCTCAGGAA GTTTTGGAGC GGCGGGCTTA
TCTATTGCGG CTAAAGAATT AGAGTTAAGC GCTAAAGCTA AAGAGGTGGA GCGAGTTCCG
CTATTGTTAG ATGAGGTGAT TGAGACGGCT CTGTTAACCC TCAAGGTATT TAAACAACGT
TTTGAACTAA CAAACGAGTA G
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| Protein sequence | MSFRIKTILG IAVIEGVLLM LLVYTSVDYL KTSNQAEIEK RASSTASLFA AAAKDAVIST
DLSTLNVLAN ELLTTSQVLY VNIYDQSRLL VSVGSINGGS VASLDSGIGN VDDGILDIER
DVQESGFTYG KVELGFDTAA LDSFITDART RFLTIAGIEM FLVALFSWLL GHYLTRNLAL
LKSASQRILQ GESKVQIPVS SDDEIGKTML AFNQMVKKVA DKNQALVSAN VRLNAILQTA
VDGFVVVDTQ GVIEEVNPAV SRLFGYSPSE LIGRNVSLLM PSNERNMHDE YIQHYLKSAD
DKTVGKGREL LAQKKDGSLF SIELSISKMR IDDEVLFLGL VKDLSDVKCA QAAAQRTESI
LLATLEGSKD ALVTIDTSGA IQEVNDAACL LFKFHSEQMI GQRLEEVLFR ADERDCFHNI
LEEYRATGEG LAVKHSTQMK ATRSDGEKVA IELTLIPVQL GQEMLLTAFI RDISRRMEYE
TQLKLAKEQA EQGSEAKSRF LATMSHEIRS PLNAVLGSVE LILESTLNKE QRIYADTAKE
AGTALLSTIN DILDFSKIEA GQIVLEESAF SPAKLATQVL QVLSPKAQDK GIALAIYVNR
NVPESLIGDG QRLRQVLHNL VDNAIKFSFG GCVAIEMWLA DVDEARLCCK ISDQGIGISE
ESQLTLFEEF SQVHDTHNTN YSGTGLGLAI CAELIAQMGG HIGVDSQQGQ GSCFSFDLLL
KRDEKEKHSY APLPIHARVL LVHPNATYCK FISRQYKQYG VTAICVDSIE AIFTASQVQG
RFNLVLIDEH CLLELNAMRV NSVKQDYLLE EGMMAALMTV VVPEASAQLR EIGLEQVINK
PLSRDMMLGM LRGEHESSAH QAQGEPVVST CDEQHLPILL AEDSPANQIV ASALLSKAGF
KVEIANNGIE ALKMASAKDY GLILMDMRMP EMDGIEATQK ILQRNPSQVV IAMTANVQKE
DVEQCMNAGM KAFVPKPVNR VNLVNVVNQW IVSAKEEAIV SYKAMGKGTE EPCSDSNNVN
HDNGESIDDD KVVPFMQTKR KSKVSAFNGT KAPLQTSSQG SEELVTIIDE AVLDELTDML
GGEAIDRMMS VFLTEAQERL SILQLLLLEY QNGNGLDLSE IDIQAHTLKS SSGSFGAAGL
SIAAKELELS AKAKEVERVP LLLDEVIETA LLTLKVFKQR FELTNE
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