| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1426 |
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| Symbol | |
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| ID | 5661823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1733240 |
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| End bp | 1734607 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235988 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001501286 |
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| Protein GI | 157961252 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCT ATGTGTCATA CCGAGACTCT TTATCCACAG CCTTAAACGG CGTGCTAGCC
AAAGGCCTAT TTTGGCTAGG TTCGGCTCAA GTGCTTGGCC GCATCGTTCG CCTAGGCTCT
AGCATTATTA TTGCGCGCTT ACTGACACCC GAAGTCTTTG GTCAGGTTGC CATCATACTC
ACCTGTTTTG AGATCATCTG CACCCCAACG CGTCGCATCT CTAGCGCGGC ACTGATTAAA
ATGGATGACA ACCAAGTTAA ACAATCTCTT ACTGCGGCCA ATCGAGTTAA CTGGTTAGCC
GCTATCACCG CCTTCGTTGC CATGAGCTTA CTCAGCTGGC CGCTTGCAAT CTACTACGAT
GACTTGCAGC TAATTCTTCC TATGATACTC ATGGCAACAA GCTATTTACT GCTGCCTTTT
GGCATGCTCT ATGCCGCACT CAATCTGCGC TTAAACCGAA TGCGAGTCGT TGGTAGGGCC
GTACTATGGC AGACGGTATT TGATGCACTG CTAACGGGCT GCTTCGCTTT ACTCGGGTTT
GGGATTTGGG CGATTATTTT GCCCAAAGTC ATTGTGGTAT TTATATGGAT TGGGGTTCAT
AGATACCACA ATCCCTTGCC TGAGGCCTCA TCGAGCGCAA ATTCCTTACC CCCGTCCCAA
GAACAGCGAT GGCAGCCACT TCCTCTGTTG CCAGCAAAAT CCAAAACAAT ACTTAAGTTT
GGCATACAAG TTGGCCTAGG TGACTTGGCT ATCGCTCTAA GGCAAAATAT TGATTACATC
TTGGTGGGCT ATTTTCTTGG GATAGAAGCC CTAGGAGTGT ACTTCTTTGC CTTCAACGCC
AGTTTAGGCA TTAGTTTAGG GCTAGTACAA AGTTATGGCA CCGCGCTTTA TTCCTATCTT
TGTCAAAAAG ATAAAGATGC TGAACCCACA CTGCTTACAT TAGAGCAAAA ATACTTTAAG
TCACTTAAGT TCATCATGTT ACTGACAGTA CCCGTAATTA GCCTGCAAGC AGCACTCGCA
CCACTCTATG TCCCTTGGGT GTACGGTCAG AAATGGTTAG ATGCTGGCGC ACTGCCAGTG
TTTATCTTGC TTTGCCTAAG CGGCCTCGTG AGGCCACTAG GAGAAGCAGC CAGTCAATAT
CTTATTAGTG CCGGTAGAAG CCAATTTAAC CTGTTGTATA ACAGTGTATT CACTTTCATT
TTGGCAGTCA CAATCGCTAT CTCTAGCAGC TGGGGGCTAC AGGCCGTCGC CCTAGGGATC
TTATTGTCAC ACCTTTTTGT TATGCCCAGT TTCACACTCT ACTTAAAGCT GACTCAAACC
ACTACAGACG CTCCTCATTG TCGCTCGGAG GCACACTATG ACTGCTAA
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| Protein sequence | MQSYVSYRDS LSTALNGVLA KGLFWLGSAQ VLGRIVRLGS SIIIARLLTP EVFGQVAIIL
TCFEIICTPT RRISSAALIK MDDNQVKQSL TAANRVNWLA AITAFVAMSL LSWPLAIYYD
DLQLILPMIL MATSYLLLPF GMLYAALNLR LNRMRVVGRA VLWQTVFDAL LTGCFALLGF
GIWAIILPKV IVVFIWIGVH RYHNPLPEAS SSANSLPPSQ EQRWQPLPLL PAKSKTILKF
GIQVGLGDLA IALRQNIDYI LVGYFLGIEA LGVYFFAFNA SLGISLGLVQ SYGTALYSYL
CQKDKDAEPT LLTLEQKYFK SLKFIMLLTV PVISLQAALA PLYVPWVYGQ KWLDAGALPV
FILLCLSGLV RPLGEAASQY LISAGRSQFN LLYNSVFTFI LAVTIAISSS WGLQAVALGI
LLSHLFVMPS FTLYLKLTQT TTDAPHCRSE AHYDC
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