| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1419 |
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| Symbol | |
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| ID | 5661816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1724390 |
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| End bp | 1725400 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641235981 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001501279 |
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| Protein GI | 157961245 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATT TAGTCACAGG TGCGGCAGGT TTTATTGGCG CAAAAGTGAG TGAGCGCTTA
TGTGCTGCTG GTCATGAAGT GGTTGGTATC GACAATATTA ACGACTATTA CGATGTTAAC
TTAAAACTGG ACCGCCTTAA AAATTTGGAG CCTCTGGCTC TTTTTTCATT TAAAAAATTA
GACTTAGCAG ATAGAGAGGG CATTGCCGCA CTATTTGCTG AGCAAAGTTT TGATCGAGTG
ATTCATTTAG CCGCTCAAGC CGGAGTTCGT TATTCTATTG ATAACCCAAT GGCCTATGCC
GACAGTAACT TGGTCGGGCA TTTGACTATA TTAGAAGGCT GTCGCCACCA TAAGATTCAG
CATTTAGTCT ACGCTTCATC TAGCTCTGTT TATGGCCTTA ACTCTAAAAT GCCATTCTCA
ACTGATGATA GTGTGGATCA TCCTATCTCT CTATATGCGG CGACTAAGAA AGCCAATGAG
CTGATGTCAC ATACCTATTC TCATCTTTAT AGTGTGCCAA CGACTGGCTT GCGTTTCTTT
ACTGTTTACG GCCCTTGGAG CCGACCAGAT ATGGCACTGC TCAAGTTCAC CAATAAGATA
GTAAAAGGTG AGGCCATTGA TGTTTATAAC CACGGTAATT TGAGCCGAGA TTTTACCTAT
ATCGATGATA TCGTTGAAGG CATCATTCGT ATTCAAGATA GTATTCCAAG TGCTAATGCA
GAATGGAATG CGGCTGAGGC AACACCAGCA ACAAGCTCTG CACCGTATCG CGTATTTAAC
ATAGGTAACG GCAGTCCGGT TAAGCTGATG GATTATATCT CTGCACTTGA GAAATCATTG
GGGATTGAAG CCATTAAAAA CATGATGGAC ATGCAACCAG GTGACGTGCA TTCAACATGG
GCTGATACTG AAGACTTGTT TAAGACTGTT GGTTACAAGC CACAAACTAG CGTCGAAGAA
GGCGTACAAA AGTTTGTTGA ATGGTATAAA GAATATTACA TGAAAGGCTG A
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| Protein sequence | MKYLVTGAAG FIGAKVSERL CAAGHEVVGI DNINDYYDVN LKLDRLKNLE PLALFSFKKL
DLADREGIAA LFAEQSFDRV IHLAAQAGVR YSIDNPMAYA DSNLVGHLTI LEGCRHHKIQ
HLVYASSSSV YGLNSKMPFS TDDSVDHPIS LYAATKKANE LMSHTYSHLY SVPTTGLRFF
TVYGPWSRPD MALLKFTNKI VKGEAIDVYN HGNLSRDFTY IDDIVEGIIR IQDSIPSANA
EWNAAEATPA TSSAPYRVFN IGNGSPVKLM DYISALEKSL GIEAIKNMMD MQPGDVHSTW
ADTEDLFKTV GYKPQTSVEE GVQKFVEWYK EYYMKG
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