| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1417 |
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| Symbol | |
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| ID | 5661814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1720905 |
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| End bp | 1722413 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235979 |
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| Product | RNA-metabolising metallo-beta-lactamase |
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| Protein accession | YP_001501277 |
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| Protein GI | 157961243 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.436824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAATTA TCCATCATGG TGCTGTTAAT GGAGTAACAG GCTCATGCCA TCAGTTAGAT
ATCAATCCAC AATCCAGCAT TCTAATCGAT TGCGGCCTGT TTCAAGGAGC AGAAACAGCT
GGTAGAAACG CCGTAGACCA ACTTAAGATA GAATTTGACT TAAGCCATAT TACAGCGTTA
ATTGTTACCC ACTGCCATAT TGATCACGTT GGCAGGGTCC CATATCTACT TGCCGCAGGC
TTTAATGGCC CTATTTACGC AACAACGGCA ACAGCAGCAT TACTCCCGTT GGTCATCAAA
GATGCGCTTA AGGTCGGCGT CACCAGAAAT CAGCGTTTAA TCAGTTTATA TCTAAAACGC
TTACAGCAGA TAATTAAGCC TATTGATTAC CAAAAGTGGT TTAATTTAGA GGTGAATAAT
AGCGACTGCG GCTACCAACA CGCCAAAGCT AGGTTTAACG TAGCAGGACA TATTCTAGGC
TCGGCCTATG TTGAAATAGA ACTAAGTGAC GCATCGCTAA CTCACAACTG TACTCACAAC
TATACTCGCA ATAATACTCA TAAAAGCACT CACCAGAACA CTGGTATTCA CAGCGACAAC
AGTCATGACT GTGATGCAGA CAAGAAAAAA GACAGCCATA TGGTTGTATT TTCTGGTGAC
TTAGGCGCAA CTAACACCCC GCTATTGCCA AGCCCTAAAA GCCCATTGCG CGCCGACACA
TTAGTAATAG AGTCGACCTA TGGTGATAAA AATCACCATA ATCGTGAGCA CAGAGCCGAA
AGCTTACGCC AAGTGATAGA GAGAGCAGTA AACGACAACG GTGTTGTTCT TATTCCGGCC
TTTAGCATTG GCCGAACCCA AGAGTTACTG TATGAATTAG AGCAAATTAT CTTTAGCCAA
CAACAAAACC CGATGTGGCA GAGTATAGAC ATCATTGTCG ACTCCCCTAT GGCAGCCAAT
TTTACCGAGC AATATATAGA TTATAAACAC TTGTGGGACA CAGAAGCCAA AGCAGTACTA
GCGGAGCAAC GCCATCCGCT CGACTTTAGT CAGCTTTACA CCATAGATAG CCACCAAGAT
CACCTAGCGG TAATCAACTA CCTAGCCAGC AGACAAAAGC CAACTGTTGT AATTGCAGCA
AGCGGGATGT GCACAGGCGG GCGAATCGTC AACTATCTAC AGCGATTTCT ATCTGAACCG
ACTGCAGATG TGCTATTTGT GGGATACCAA GCAACTGGAA CTATCGGACG AGATATTCAA
GAATACGGAC CACGCGGAGG TTATGTATAT ATTGAAGGGG ATAAAATCGA TATCAAAGCA
GGAATTCACA CCATCAGTGG CTATTCCGCC CATGCAGATC AACAAGATCT GATTGATTTT
GTCGAAGGCA TCAAACATAA ACCAAAACAT ATCCGCATCG TTCACGGCGA CACCGAGGCA
AAACAAACGT TAGCGGATAA ATACCGCCAA CTCTTACCTA ACACAGAGAT TGAAATAGGA
ACAAGCTAG
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| Protein sequence | MQIIHHGAVN GVTGSCHQLD INPQSSILID CGLFQGAETA GRNAVDQLKI EFDLSHITAL
IVTHCHIDHV GRVPYLLAAG FNGPIYATTA TAALLPLVIK DALKVGVTRN QRLISLYLKR
LQQIIKPIDY QKWFNLEVNN SDCGYQHAKA RFNVAGHILG SAYVEIELSD ASLTHNCTHN
YTRNNTHKST HQNTGIHSDN SHDCDADKKK DSHMVVFSGD LGATNTPLLP SPKSPLRADT
LVIESTYGDK NHHNREHRAE SLRQVIERAV NDNGVVLIPA FSIGRTQELL YELEQIIFSQ
QQNPMWQSID IIVDSPMAAN FTEQYIDYKH LWDTEAKAVL AEQRHPLDFS QLYTIDSHQD
HLAVINYLAS RQKPTVVIAA SGMCTGGRIV NYLQRFLSEP TADVLFVGYQ ATGTIGRDIQ
EYGPRGGYVY IEGDKIDIKA GIHTISGYSA HADQQDLIDF VEGIKHKPKH IRIVHGDTEA
KQTLADKYRQ LLPNTEIEIG TS
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