Gene Spea_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1414 
Symbol 
ID5661812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp1716642 
End bp1717238 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content34% 
IMG OID641235977 
Productsugar transferase 
Protein accessionYP_001501275 
Protein GI157961241 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAAAC GGACTTTTGA TTTTCTTCTA TCTGGTGTCG GGTTATTATT TTTATCGCCT 
TTATTTTTAA TCGTTGCTAT ATGGATTAAA GTTGACTCTC CTGGGCCTAT TTTTTTTAGA 
CAGAGTAGGG TTGGTTTATT CGGAAGGGAT TTTCTAATTC ATAAGTTCAG AACAATGAGG 
GTTGATTCTG AATCATCTGG GCGTTTAACA GTTGGTAAAG ATAGTCGAAT CACACGTTCA 
GGCCATTTTC TCAGGAAATC TAAAATTGAC GAGTTACCAC AATTGATAGA TGTTCTGCTA 
GGCACAATGA GTTTGGTTGG GCCTAGGCCT GAAGTTAGGG AGTTTATTGA TTGTTATCCA 
GATGATGTTA AAGAAAAAGT TCTCTCTGTT AGGCCTGGTA TTACAGATAG AGCTTCTATA 
GAGATGGTCG ATGAAAATGA GATTTTGTCA AAGTATGAAG ATCCCAGACA AGCTTATATA 
GAGCATATAT TACCAATTAA ACAGAATTAT TATATTGAAT ATGTAAAAAA TAATACGTTA 
CTTCTGGATG TTACTCTTAT TTTTCAAACT TTGTTGAAAA TTATTGGGAA GAGGTAA
 
Protein sequence
MIKRTFDFLL SGVGLLFLSP LFLIVAIWIK VDSPGPIFFR QSRVGLFGRD FLIHKFRTMR 
VDSESSGRLT VGKDSRITRS GHFLRKSKID ELPQLIDVLL GTMSLVGPRP EVREFIDCYP 
DDVKEKVLSV RPGITDRASI EMVDENEILS KYEDPRQAYI EHILPIKQNY YIEYVKNNTL 
LLDVTLIFQT LLKIIGKR