Gene Spea_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1406 
Symbol 
ID5661804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1707724 
End bp1708515 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content36% 
IMG OID641235969 
Productnucleotidyl transferase 
Protein accessionYP_001501267 
Protein GI157961233 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1213] Predicted sugar nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAG TACTAATTTT AGCGGCTGGG CAAGGCTCTC GGCTTCGTCC TATAACCAAT 
GACAGACCGA AGTGTTTAGT ACCTTTACTA GGAAAGTCTT TATTACAAAG GCAGACGGAC
GTGTTAAAGA GTGCAGGTTT AAATAATATC CATATAGCAA CAGGCTATAG GGCAGATCAG
ATTGAAAAGC TTGGGTATGA AACTTCTTTT AATCCATTAT TCGATCAAAC AAACATGGTT
GAGTCATTAT TTTCTGCACA GTCGTTTATC GAAGGTGAGG AAGATTTAGT TATTGCATAC
GGTGATATAG TGTATCAGAA AGATAATCTT GATAAACTAT TAAGCTCTAA CGACGAAATT
GCTTTAATGA TAGATAGAGA GTGGAGAGCA TTTTGGTCAT TGCGCTTAGA AAACCCACTT
GATGATGCGG AAACATTAAA GTTAGATAGC TCTGATTTTG TAGTAGAGCT TGGTAAGAAA
ACAGAGTCAT ATGATGATGT GCAAGGTCAA TATACAGGTC TAATTAAAAT ACGTGGAGAT
AAGGTAAGTG ACTTTATTTC GTTCTACAAC TCGCTTGATA GAAGTAGAAA TTATGACGGG
CAAAATTTTA TTAACATGTA TATGACTAGT TTCCTCCAGA TGATGATTGA TTCTGGTTGG
AAAGCGAGAG CTATATTGGT CAATAATGGC TGGTTAGAAA TAGATACAGT TGAAGATCTT
GAACTGTACG AGAATATGCA TAATAGCGGT CGTTTATCTC ATTTCTACAA GTATGACTCT
AATGATTCGT AA
 
Protein sequence
MTKVLILAAG QGSRLRPITN DRPKCLVPLL GKSLLQRQTD VLKSAGLNNI HIATGYRADQ 
IEKLGYETSF NPLFDQTNMV ESLFSAQSFI EGEEDLVIAY GDIVYQKDNL DKLLSSNDEI
ALMIDREWRA FWSLRLENPL DDAETLKLDS SDFVVELGKK TESYDDVQGQ YTGLIKIRGD
KVSDFISFYN SLDRSRNYDG QNFINMYMTS FLQMMIDSGW KARAILVNNG WLEIDTVEDL
ELYENMHNSG RLSHFYKYDS NDS