| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1397 |
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| Symbol | |
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| ID | 5661795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1698048 |
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| End bp | 1699025 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235960 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001501258 |
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| Protein GI | 157961224 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3765] Chain length determinant protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGC AAGTACAACA AAATCACACA GACGCACAGT TTCCGCATAT GAACCCCGTT
CATAATCCGG TCGAAGATGA AATCGATCTT CGCGAACTCT TTTCAGTCAT CTGGCAGGGC
AAATGGCTAA TCATTGCCAT CACAGCTATT TTCGCTATTG GCTCCGTTAT CTTCGCCCTA
ATGCAGCCAA ATACCTATAA ATCTGAGGCC TTACTTGCAC CAGCAAGTGA AGAGCAAGGT
GGTGGACTAA GCGCATTAGC AGGTCAGTTT GGGGGGCTTG CAAGCATGGC AGGCATAAAC
CTTGGCGGTG GTGGTGGTGT TGATAAGACT CAAATGGCTA TAGAGGTGAT GAAATCACGC
CAATTCGCAA GTCAATTCAT CCAAAGCCAC AATATCTTGC CGGAGCTTAT GGCTGCAGAT
AAGTGGGATA TGGCAACTGA TGCGCTTGTT TATGACAGCG AGCTTTATAA CCCGCAAACT
AAAACTTGGT TGCGTGAAGT AAAAGCGCCA TTCAAGCCAG AACCTTCAAT GCAAGAAGCA
TTTAAAGAGT TCACTAAAGT TATAGCGGTT AATTCTGCAA AAGATACTGG CATGGTCACA
ATCTCAGTTG AACATCTATC ACCTAGCGTT GCACAGCAGT GGGTGACTTG GTTAGTCGAA
GATATTAACA AGGTGATGAA AGAGCGAGAT GTTACAGAAG CTCATCGCAG TAGTGAGTTT
TTGGAAACTC AAATCGCTAA AACCAACGTA GCTGACATTC GTACTATTCT CTATCAACTT
ATTGAAGAGC AAACCAAGAC TATTATGTTT GCTGAAGTAC GCGACGAATA TGTATTTAAA
ACGATTGATC CAGCTTTAGT TCCTGAAGAA AAAGCTGGCC CTAAGCGTGC GTTGATATGC
GTCTTAGGTA CCATGCTTGG TGGCATGCTA GCCGTAATGA TTGTCCTAAT AAGACATTTT
GTAAGGAAAG AAGATTAG
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| Protein sequence | MNKQVQQNHT DAQFPHMNPV HNPVEDEIDL RELFSVIWQG KWLIIAITAI FAIGSVIFAL
MQPNTYKSEA LLAPASEEQG GGLSALAGQF GGLASMAGIN LGGGGGVDKT QMAIEVMKSR
QFASQFIQSH NILPELMAAD KWDMATDALV YDSELYNPQT KTWLREVKAP FKPEPSMQEA
FKEFTKVIAV NSAKDTGMVT ISVEHLSPSV AQQWVTWLVE DINKVMKERD VTEAHRSSEF
LETQIAKTNV ADIRTILYQL IEEQTKTIMF AEVRDEYVFK TIDPALVPEE KAGPKRALIC
VLGTMLGGML AVMIVLIRHF VRKED
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