| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1395 |
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| Symbol | |
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| ID | 5661793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1694703 |
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| End bp | 1697498 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235958 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001501256 |
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| Protein GI | 157961222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0391429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTTAACA AGACTAAAAA ATTCATCATT GCTGGTATGT CAGCGCTGAT ATTGCTATCA
GGGCAGGCGA GTGCTATCAC GCCTTCTCCA CAAATGATGG AACAATTTAA AAATCTTCCA
GCATCTGAGC AGCAACGCTT AGCTAAACAG TATGGTATCG ATCCTTCAAT GCTTGGCGGT
GGCAGTAGCT CACAGCCACA GCTTGAAAAT CCAAACTTAG TTAATCAACG CGCCCAGTAC
GACGAGAATG GTCAGTTAAT TCAAACAGAT CAGTTTGGTA ATCCAGTTGA TGCATTTGGC
AAACCGCTAA AGGATAAGTC CGATGAGCAA CTTAAGTTCG AAGAAGATGC AGCTAAAAAA
GAGTTAAAGC GTTTTGGCTA TGACTTGTTT GCAGGCGAAC CAACCACTTT TGCGCCAGTA
TCAGATGTCC CAGTACCGAG CGAATATTTA GTCGGCCCTG GCGACAACAT AAAAGTACAG
CTTTTTGGCA AAGACAATAA AGAGTACGAC CTTGTTATTA ATCGTGAAGG TGTAATCCAA
TTTCCAGAGC TTGGTCCAAT CACTGTTGCA GGGTTAACCT TTAGCGAACT GCGCGAAACC
TTATCAGAGC GTATCAATCA GCAGATGATT GGTATTCAGT CAAATATCAC CATGGGTGAA
TTACGCTCAA TCCGTATTTT TGTTGCGGGT GATGCCTACA AACCTGGTTC TTACACAGTA
TCTAGCCTTT CTACTATCAC CCAAGCTTTG TTTGTAGCTG GTGGTGTAAA CGAAATCGGT
TCGCTACGAA ATATTCAAGT CAAACGTAAC GGCAAGCTAG TCGGTAGTAT GGACTTATAT
GATCTGCTAC TTCGTGGTGA TGCTTCTGGC GATATCAATT TACGTTCTGG CGATGTGGTA
TTTATCCCTG CTGTAGGCGG CTTAGTCAGC GTAACTGGTG AAGTACGTCG CCCAGCCATC
TATGAGCTTA AAAAGCATGA AACAATGGCG CAAGTCATTG AGATGGCAGC AGGCATAAAG
CCTGGTGCTT ATCCAAGACG CAGCAGCGTT GAACGTTTTA ATGCAAATAG CCTTAAGACG
ATTCTAAATG TTGATTTAAC TACTCAAGCT GGTAAAGCGA CTAAAGCTGT TGCTGGCGAT
GTTATCCGTG TTAAAAGCGC GACAACGCAA TATGAAGATG CAATCACTGT AGTGGGCGCC
GTTGTAAGAC CAGGTAAATA CCAGTGGTAT CAAGGGCAGA AAGTCAGTGA TTTGGTGCCT
TCAATTTGGG GCGACTTATC AGTGTCGGCC GACCTTGAAT ACGCAATCAT CGTACGTGAA
ATCAATAAGC AAGGTGACAT TCAGGTTTAT CAATTCTCTC CAGCAAAAGC TATTAACGGT
AAGGTCGCTT CACAAGACTT AACTTTGCAG GCTCGAGATA AAGTTATCTT CTTTAACTTT
AGCGACCTAA CTCAAAACCG TTATGAGCTA AATAAGCTAG TAAAAGATCG AGTTCAGAAG
GTTCAGTCAT TAGCGGGCAA TTCATTAATT GGTAACGATC TGTTTGAAGC TGGGTTTTCA
CAATTAAACC AGAAAAAGTT TGCCGATCGC TCAGAACTAG GTGGCGTGGC CATTAACAGT
CAAGGCGTAG AGCAAGACCC AACAGCCAAA GCGATAAAAG GCGAAGTCAA CAAGATGTTG
GTTAACCTGT TTGAAGACAG TGACCTAATC AAGCTAAGTG GTGAGATGAA TCGTGGTGAA
TTACTTTACC CCATCATTAT GAAGCTCAAT AGCCAAGGGC GTGCAGGTAA CGGTGTTGCC
GCTGTTGCAG TTAACGGCCG AGTGAATAAT CCAGGCATCT ACCCACTAAC AGTTAATGCA
CGTATTAAAG ACCTGATCAC TGCTGCTGGC GGACTGGAAG AAGGTGCCTA TACGCCGCGT
GCAGAATTAA CCAGTACCTA TACAACGGTT GATGGTTCAG CGATTAAGCA TACCAATATT
GCTTTAGAAG CTGCACTGCA AGGTGACGAA ACCCAGAATA TTGCAATCAA AGGTCGTGAT
ATTTTAACCG TGATGACAAC ACCAGACTGG CAAGAGAATA AGTCGGTTGA AATTCGCGGT
GAAGTTAAGT TCCCTGGTAC CTACAACATT CGCCGTGGTG AAACCCTAGC CGATGTATTA
AAGCGTGCTG GTGGTTTTAC CGAATATGCC TATTTACCTT CTTCTGTATT TGTGCGCGAA
TCTGTGCGTC AACAAGAGCA GTTAGAGATT AAAAAGTTGG CAGACCAACT ACGCCGTGAT
ATCGCCACTC GTGGTGTATC AAAAGACGGT AATGTTGTTA ATTATACCGA CGCTCAATTG
ATGTTAACCG ACTTGGAAAC AATCCAAGCG GTAGGGCGTT TGGTAGTTGA TTTATCAGCT
ATATCTGTTG GTATTAAGCA GGCAGACCTC CAGCTAGAAG ATCAAGACGT ACTCTATATT
CCATCAACTA AGCAGACTAT TGCGGTTATG GGCGAAGTAC AGCACGCAGC AACCCATAGA
TTTAAAGAAG GTCAAACTCT CGACCAATAC TTAGCCATGT CAGGTGGTGC AAGAGAACGC
GCCGATGATG ACAGAACCTA TGTGATAAAG GCAGACGGTT CAGTAATGCT ACCAAACCGT
TCTATCTGGT TCAGTAATGA GTCAAGCCTA CAGCCAGGCG ACACCATCAT TGTGCCACTC
GATACCGAGT ACAAAGACAA CCTAACACTT TGGACGCAAG TCACCAGTAT CATCTACAAC
ACAGCAGTAG CATTCGCCAC AGTCGCAAAT CTTTAA
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| Protein sequence | MLNKTKKFII AGMSALILLS GQASAITPSP QMMEQFKNLP ASEQQRLAKQ YGIDPSMLGG
GSSSQPQLEN PNLVNQRAQY DENGQLIQTD QFGNPVDAFG KPLKDKSDEQ LKFEEDAAKK
ELKRFGYDLF AGEPTTFAPV SDVPVPSEYL VGPGDNIKVQ LFGKDNKEYD LVINREGVIQ
FPELGPITVA GLTFSELRET LSERINQQMI GIQSNITMGE LRSIRIFVAG DAYKPGSYTV
SSLSTITQAL FVAGGVNEIG SLRNIQVKRN GKLVGSMDLY DLLLRGDASG DINLRSGDVV
FIPAVGGLVS VTGEVRRPAI YELKKHETMA QVIEMAAGIK PGAYPRRSSV ERFNANSLKT
ILNVDLTTQA GKATKAVAGD VIRVKSATTQ YEDAITVVGA VVRPGKYQWY QGQKVSDLVP
SIWGDLSVSA DLEYAIIVRE INKQGDIQVY QFSPAKAING KVASQDLTLQ ARDKVIFFNF
SDLTQNRYEL NKLVKDRVQK VQSLAGNSLI GNDLFEAGFS QLNQKKFADR SELGGVAINS
QGVEQDPTAK AIKGEVNKML VNLFEDSDLI KLSGEMNRGE LLYPIIMKLN SQGRAGNGVA
AVAVNGRVNN PGIYPLTVNA RIKDLITAAG GLEEGAYTPR AELTSTYTTV DGSAIKHTNI
ALEAALQGDE TQNIAIKGRD ILTVMTTPDW QENKSVEIRG EVKFPGTYNI RRGETLADVL
KRAGGFTEYA YLPSSVFVRE SVRQQEQLEI KKLADQLRRD IATRGVSKDG NVVNYTDAQL
MLTDLETIQA VGRLVVDLSA ISVGIKQADL QLEDQDVLYI PSTKQTIAVM GEVQHAATHR
FKEGQTLDQY LAMSGGARER ADDDRTYVIK ADGSVMLPNR SIWFSNESSL QPGDTIIVPL
DTEYKDNLTL WTQVTSIIYN TAVAFATVAN L
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