| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1394 |
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| Symbol | |
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| ID | 5661792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1692692 |
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| End bp | 1693213 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235957 |
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| Product | transcriptional acivator RfaH |
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| Protein accession | YP_001501255 |
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| Protein GI | 157961221 |
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| COG category | [K] Transcription |
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| COG ID | [COG0250] Transcription antiterminator |
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| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0133861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGCTT GGTATCTATT ATATTGCAAG TCTCGAGGCG AGTCCCGAGC GCAGCAAAAC
CTGGCTCTTC AGCAGATTGA TACCTATCTG CCTACCTACC CAGAAGAAAA GTTAGTAAAA
GGACAATCTA CAGTAAGGCG AGTCTTGCTG TTCCCTAGTT ATTTATTTGT TCATTTCGAC
CCCGAAATTA CTAGCGTAGC TAAGATCCAT AACACCAGAG GTGTGATCAG GATCGTTGGC
TGTAAAGAAC TCATGACGCC TATCGATGAC AGTATTATTC ACGCCATTAA AATGCGTGAA
CATAGATTGA TGTCAGAACT TTCCCCCATA GAGGCAGCGC CAACAATCGA GCCAGAGATG
GAACGAGGAG ATAAAGTGTG CTTTACCGAA GGGCCATTTG CAGAACTCGA AGGGATCTTC
GATGAGGCTA ATGGTGAGAA GCGTTGCTTT GTTCTGTTTG ACCTAATGGG TAAGCAACAG
CGAGTTGCAA TAAAGAAAGA CTCAATAAAA CCGGTTAAAT AG
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| Protein sequence | MKAWYLLYCK SRGESRAQQN LALQQIDTYL PTYPEEKLVK GQSTVRRVLL FPSYLFVHFD
PEITSVAKIH NTRGVIRIVG CKELMTPIDD SIIHAIKMRE HRLMSELSPI EAAPTIEPEM
ERGDKVCFTE GPFAELEGIF DEANGEKRCF VLFDLMGKQQ RVAIKKDSIK PVK
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