| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1393 |
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| Symbol | |
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| ID | 5664706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 1690742 |
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| End bp | 1692247 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235956 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001501254 |
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| Protein GI | 157961220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.825614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCAG CAAAACCCAA GGGGACGATG CTCGGGCATC CAACGGGACT ATTCCTGTTG
TTTACAACAG AGTTATGGGA ACGTTTTAGT TATTACGCAA TGCGCGCGAT CTTGGTGCTT
TATCTAGTAG ACCAAGTCAG TAATCAAGGT GGTGGTGGTC TTGGTTGGAC ACAGGCTGAT
GCCCTTTCGC TATACGGAAC ATTTACCGCG CTAGTTTACC TTACGCCACT TTTCGGCGGT
TGGTTAGCCG ATAATATTTT GGGCCAACGT AAATCGATTT ATATCGGTGG CGCATTGATG
GCTGCTGGTC AGTTCTTGTT AGCTGCTCCA CATGAGTGGG TTCCAGGCTC TGCAACCATG
GTATTCTACA TTGGTTTAGG TACCCTGATC ATTGGTAATG GTCTTTTCAA GCCAAACATC
TCAACCATGG TAGGTGACTT ATATGAAGAA GGTGATCACC GTCGTGACGG CGCATTCACT
ATCTTCTACA TGGGTATTAA CTTAGGCGCG GCATTATCTG GTTTTGTAGT AGCCTGGGCT
TATACTAACT TTGGTCATAG CGCTATCGTT GACGGTAAAG AAGTTTTCAT CAATAACTGG
CAGGCAGGTT TCTTCTGTGC TGGTATTGGT ATGATTCTTT CGCTAATCAT TCAATTTGTA
TTTGCTCAAA AATTACTTGG CGATATCGGT ACCGTTCCTG CTGCAAAACT AGAAAAGCAG
AAAGCTGCTG AATCTGGTCA AGTGCGTAAA GAACCTTTAA CTAAGATTGA ACGCGATCGC
ATTAAAGTGA TTATGGTTAT GGGTCTGTTT ACCATCATAT TCTGGGCAGG TTTTGAACAG
GCCGGCGGCC TGATGAACCT ATTCACTAAC GACTTTACTG ATCGTATGAT TGGCGGCTGG
GAAGTCCCAA CCACTTACTT CCAATCTTTA AACGCTATCT TTATTGTTTT ATTTGCTCCT
GTGATTGCCT CTATCTGGAT CCGTTTAGGC AAAAATGAAC CAAACTCTCC AGTGAAATTT
GCACTAGGTC TAGTACTACT AGGTATTGGT TTCCTATTCA TGATCGGTGC CGTTTTACAA
ATGGACGGTG ACGCTAGTGC TAAATCAAGC ATGTGGTGGT TAGTGGGTGC ATACTTCTTC
CATACAATGG GTGAATTATG TCTATCACCT ATTGGTCTAT CTATGGTGAC CAAGCTTGCT
CCACTGCGTA TTGCATCGTT AATGATGGGC GCATGGTTCC TATTCATCGC CGCAGCTAAC
TTTGTTGCCG GTGTTGTGGG CTCTATGATT GGTCACAGTG GCGCTAAAGA AGAGCAACTT
GCTAATGCAA TGTCTATCTT CGCAGGTATC GCGATTGTAG CTGCAATTTC TGGTGTTGTT
CTTTACTTCC TTGCTGACAA GCTTGTTGAC TGGATGCATG GCGCTGAAGG TGGCCCGCAT
ACTGAAGAAG AAGCTTTGAC AGAAGAAATC GCTATTACTG CAGAGCATGA AGCTATTAGA
AGATAG
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| Protein sequence | MNAAKPKGTM LGHPTGLFLL FTTELWERFS YYAMRAILVL YLVDQVSNQG GGGLGWTQAD
ALSLYGTFTA LVYLTPLFGG WLADNILGQR KSIYIGGALM AAGQFLLAAP HEWVPGSATM
VFYIGLGTLI IGNGLFKPNI STMVGDLYEE GDHRRDGAFT IFYMGINLGA ALSGFVVAWA
YTNFGHSAIV DGKEVFINNW QAGFFCAGIG MILSLIIQFV FAQKLLGDIG TVPAAKLEKQ
KAAESGQVRK EPLTKIERDR IKVIMVMGLF TIIFWAGFEQ AGGLMNLFTN DFTDRMIGGW
EVPTTYFQSL NAIFIVLFAP VIASIWIRLG KNEPNSPVKF ALGLVLLGIG FLFMIGAVLQ
MDGDASAKSS MWWLVGAYFF HTMGELCLSP IGLSMVTKLA PLRIASLMMG AWFLFIAAAN
FVAGVVGSMI GHSGAKEEQL ANAMSIFAGI AIVAAISGVV LYFLADKLVD WMHGAEGGPH
TEEEALTEEI AITAEHEAIR R
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