| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1382 |
|---|
| Symbol | |
|---|
| ID | 5661781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1679983 |
|---|
| End bp | 1681164 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641235946 |
|---|
| Product | chemotaxis-specific methylesterase |
|---|
| Protein accession | YP_001501244 |
|---|
| Protein GI | 157961210 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATTA AAGTTTTAGT CGTTGATGAT TCGAGTTTTT TTAGACGACG TGTTAGTGAG
ATAGTGAATC AAGACCCTGA GCTTGAGGTG GTGGGGACTG CCTGTAATGG TGCAGAGGCG
GTGAAGATGG CTGCAGAGCT GAACCCGCAA GTGATCACCA TGGATATCGA AATGCCTGTC
ATGGATGGGA TCACTGCGGT TAAAGAGATC ATGGCGAGTA AGCCAATTCC AATCTTGATG
TTTTCATCAT TGACGCACGA TGGTGCTAAG GCAACGTTAG AAGCGTTGGA TGCCGGCGCT
TTAGATTTCT TACCAAAACG CTTTGAAGAT ATCGCAAGTA ACAAAGATGA CGCTATAGCG
CTGTTACAGC AACGTATTCG AGCATTAGGC CGCCGTCGCT TGTTTAGACC CATAACTCGA
ACATTGTCGA GTAACGATAG AGCGCTTTCA GGCAATGAAA GAGCTCAATC TGTCACAGAT
AGATCTCGCC CAATCTCAAG TTTTTCTCGA ACGAGTGTTA ATGCACCAGC AACTAGCGGT
CACTCGTTAA CTGCTAGCGA TAAGCCCGTG AGTCGTTCTA GTGTTGTGAC CCGTAGTAGT
GGAAAACAAT ACAAGACGTT ATTAATCGGT ACCTCTACAG GTGGGCCTGT TGCTTTACAA
AAGGTGTTAA CTCAATTCCC TGCCAATTAT CCACATCCTA TTTTGCTTAT CCAACATATG
CCTGCTGCCT TTACGCCAAC ATTTGCGGCT AGGCTTAATG GCTTGTGTAA GATAGAAGTT
AAAGAGGCGG TGAGCGGAGA CCAGTTAAGG CCGGGTTGTG CATATCTTGC CCCTGGAGGT
ATGCAGATGA TGCTAGAGCG AGGCGGAGCC TATGGCAGAG TTAAGATCAT TGCTGGTAAG
GCGGATATGA ACTACAAGCC TTGTGTCGAT ATTACTTTTG CCTCAGCTTC GAAGGTGCTT
GGTGGTGATG TGTTGGCCGT AGTGCTCACG GGCATGGGAG CCGATGGCCG TGAAGGGGCC
AGAATGCTCA AGAGTATCGG TGCGACCATT TGGGCGCAAG ATGAGGCCAG CTGTGTGGTT
TATGGCATGC CTCAAGCCGT CGCGGCTGCG GGTATTGCAA CCAAATCAAT TGCGTTAGAG
CATATGGCTG AATCGATTTT AAAAGAGACC GTTAATGGCT AA
|
|---|
| Protein sequence | MGIKVLVVDD SSFFRRRVSE IVNQDPELEV VGTACNGAEA VKMAAELNPQ VITMDIEMPV
MDGITAVKEI MASKPIPILM FSSLTHDGAK ATLEALDAGA LDFLPKRFED IASNKDDAIA
LLQQRIRALG RRRLFRPITR TLSSNDRALS GNERAQSVTD RSRPISSFSR TSVNAPATSG
HSLTASDKPV SRSSVVTRSS GKQYKTLLIG TSTGGPVALQ KVLTQFPANY PHPILLIQHM
PAAFTPTFAA RLNGLCKIEV KEAVSGDQLR PGCAYLAPGG MQMMLERGGA YGRVKIIAGK
ADMNYKPCVD ITFASASKVL GGDVLAVVLT GMGADGREGA RMLKSIGATI WAQDEASCVV
YGMPQAVAAA GIATKSIALE HMAESILKET VNG
|
|---|
| |