| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1357 |
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| Symbol | |
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| ID | 5661756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1652848 |
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| End bp | 1654281 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641235921 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001501219 |
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| Protein GI | 157961185 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.569936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA CAGATCAACG AATTCTACTT GTCGGTAACC AGTCAGAGCG AATTAATCGC
TTGTCGTGTG TATTTGAGTT CTTAGGAGAG CAGGTCGAAC TGATCGACTT CGATAAACTC
GAGACGTACA CTAAGCAGAC GCGCTTTCGC GCGATTGTTT TACCTTCTGA GAACCAATCG
AAAGAACTTA TCCAGTCTTT GACTGGTACG CTTCCTTGGC AGCCTTTTTT AATGTTAGGG
GAAAGAGGCG ACATTAAAAC GTCGAATATT CTCGGCTGCA TCGAAGAACC CTTAAACTAC
CCACAATTAA CTGAGTTACT CCACTTTTGT CAGGTCTATG GTCAAGTTAA ACGTCCAGAG
ATCCCAACTA GCGCAAATCA GACTAAATTA TTTAGAAGTT TAGTGGGTCG TAGCGAGGGT
ATTGCCAATG TTCGTCACCT CATTAATCAG GTGGCAGGTT CTGACGCTAC AGTATTAGTA
CTTGGGCAAT CAGGAACGGG TAAAGAAGTG GTTGCTCGTA ATATTCACTA TATTTCAGAA
CGTCGCAATG GACCGTTTAT TCCGGTAAAT TGCGGTGCGA TTCCTCCAGA ATTACTGGAG
AGTGAACTTT TTGGTCATGA GAAGGGTTCA TTCACCGGGG CAATCAGTGC ACGTAAAGGT
CGTTTCGAAC TTGCGGAAAA AGGCACCTTA TTCCTCGATG AGATTGGCGA TATGCCATTG
CAGATGCAAG TTAAATTATT ACGTGTACTG CAAGAGCGTA TGTTTGAGCG TGTTGGTGGC
AGTAAGTCTA TTTCAGCCGA TGTTCGCGTT GTTGCTGCAA CCCATAGAAA CTTAGAAACC
ATGATAGAGA AGGGAGATTT TAGAGAAGAT CTCTATTACC GCCTCAATGT TTTCCCAATC
GAAATGCCTG CTTTGTGCGA ACGCAAAGAA GATATCCCCC TGTTACTGCA AGAATTAGTC
AGCCGTGTTT ATAACGAAGG CCGCGGCCGA GTTCGTTTCA CTCAACGTGC AATCGAGTCT
CTTAAAGAGC ACTTATGGTC AGGTAACGTT CGTGAACTGT CTAACTTGGT TGAACGTTTA
ACGATTCTTT ATCCGGGTGG ACTGGTCGAT GTCAATGACT TACCTATCAA GTACCGTCAT
ATCGATGTTC CTGAATACTG TGTCGAAATC AGTGAAGAGC AGCAAGAGCG TGACGCTTTA
GCCTCTATCT TCAACGATGA AGAGCCTATC GAGATCCCAG AGACGCGATT CCCGAGTGAG
TTGCCACCAG AAGGGGTCAA CTTAAAAGAC TTATTGGCAG AGCTTGAGAT CGATATGATC
AGACAAGCAC TAGATCAACA AGATAGCGTG GTTGCCCGTG CAGCAGAAAT GCTAGGCATT
CGTCGTACCA CCTTAGTTGA AAAAATGCGT AAGTACGGAT TGAGTAAAGA TTAA
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| Protein sequence | MMQTDQRILL VGNQSERINR LSCVFEFLGE QVELIDFDKL ETYTKQTRFR AIVLPSENQS
KELIQSLTGT LPWQPFLMLG ERGDIKTSNI LGCIEEPLNY PQLTELLHFC QVYGQVKRPE
IPTSANQTKL FRSLVGRSEG IANVRHLINQ VAGSDATVLV LGQSGTGKEV VARNIHYISE
RRNGPFIPVN CGAIPPELLE SELFGHEKGS FTGAISARKG RFELAEKGTL FLDEIGDMPL
QMQVKLLRVL QERMFERVGG SKSISADVRV VAATHRNLET MIEKGDFRED LYYRLNVFPI
EMPALCERKE DIPLLLQELV SRVYNEGRGR VRFTQRAIES LKEHLWSGNV RELSNLVERL
TILYPGGLVD VNDLPIKYRH IDVPEYCVEI SEEQQERDAL ASIFNDEEPI EIPETRFPSE
LPPEGVNLKD LLAELEIDMI RQALDQQDSV VARAAEMLGI RRTTLVEKMR KYGLSKD
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