Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1349 |
Symbol | |
ID | 5661748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1642832 |
End bp | 1644754 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235913 |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_001501211 |
Protein GI | 157961177 |
COG category | [N] Cell motility |
COG ID | [COG1256] Flagellar hook-associated protein |
TIGRFAM ID | [TIGR02492] flagellar hook-associated protein FlgK |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTTAG ATTTAATGAA TATAGCTCGC ACAGGCGTGC TGGCCTCTCA ATCGCAACTG GCGATAACCA GTAATAACAT CGCTAATGCT AATACTGCAG GCTATAACCG TCAGGTGGTT TCACAGTCGG CGCTTGATTC ACAGCGCATG GGCAATGACT TTTATGGTGC GGGTACCTAT GTCTCTGATG TTAAACGCGT CTATAACGAC TACGCCACAA GAGAGTTGCG TATTGGCTCT ACTGCTGTCA GTGAGACGCA AACAACGTTT GGCAAGATGA GTGAGTTAGA TCAGCTGTTC TCACAAATCG GTAAAGGGGT ACCAGAAGGG CTAAACAATT TCTTTGCCAG CATGAACGCC TTATCTGATA TCCCTGGTGA TTTGGGAATG CGAGGTTCAA TGCTGACCAG CGCTAACCAA TTAGCCGACA GCATTAATCA AATGCAAGGG CACCTTGATA GCCAGATGAC TCAGACCAAT GACCAGATTG CCGCAGTAAC GACTCGTATC AATGAGATCA GTAAAGAATT AGGCAATATC AACAGAGAGC TGATGAAGTC TCAGGGCGAA GACATGCAGC TCTTAGACAA ACAAGATGCA CTGATTTTAG AGCTGAGTGA GTATGCCTCT GTTAACGTAG TGCCACTCGA TTCAGGAGCC AAGAGTGTGA TGCTTGGCGG TTCTATGATG TTGGTATCGG GCGAAGTCTC GATGCAAATG GGCACAGTGC AAGGTGACCC TTACCCTAAT GAGTTACAGA TCACCGCACA GTCGGGCAAT AAGAGCATGA TTGTTGATGC AACCAAACTG GGAGGTCAGT TAGGTGCATT AGTTAACTAC CGCGATGAAA CTTTGACCCC ATCGCAGATG GAGTTTGGTC AATACGCATT AGGTGTAGCC GATGCGTTTA ATCAGGCGCA GGCACAAGGT TTTGACTTAA ATGGTCAAGT CGGCGCCAAT ATCTTTACCG ATATTAACGA CCCATCAATG CAGATTGGCC GTGTCGGTGC ACTATCGAGC AATACGGGCA CTGCAAATCT AAGCGTTAAT ATTGACGATG TTGGCAGTTT AACTGGCAGC AGTTATGAGC TTAAGTTTAC CGCTCCATCA ACCTATGAGC TAAAAGATGC CGCCAGCGGC AATATTACGC CGCTGACGTT AAACGGCACT AAGCTCGAGG GCGCTGATGG CTTTAGCATC GACATCGACG CGGGGGCACT CGCCTCTGGT GACACCTTTG AGATTCGTCC AACTTCGGGG GCGGCGGCCT CAATATCGGT CGAGATGACA GACGGTAAAG GCATTGCCGC GGCGGGAACT AAAATTACTG CCGATGCGGC AAACACCGGT AATAGCCAAG TCAAGCTTGT GAGTATCGAT GACAGAACGG ACACCAATTT CCCGGTTACA GGTTCAGAGC TCACCTTTGA AATCGATCCT GCTGCCACGC CGCCCACATT TGAAGTGTTT GACGTTGATG GCACATCGCT TGGCGCCGCC GCAGCTTATA CACCCCCGAA TATCAGCGCT CATGGTTTTA CCTTCGAGAT TGATTCTACC GCAGCGACTG CGGAGAAGTT TACCTTCGAC TTATCATTTG CTGAAGGTGA TAACACTAAC ATGGTGAACA TGGCCAAGCT CAATGAAGCT AAATTGATGA ATGGTGGCAA AACAACGTTA AATGACGTGT ATGAAAACAC TAAGTTTGAT GTGGGCAGCA AGACTAAAGC TGCTGAGGTT GCTATGGGGT CTGCTGATGC AATATACACT CAAGCCTATA CCCGAGTACA AAGTGTGTCA GGGGTTAATC TTGATGAAGA GGCGGCAAAC TTGATGCGTT TTCAACAGTC TTATCAGGCG TCGGCACGGA TCATGACCAC AGCCAATGAA ATATTCAACA CACTATTTAG TTCTCTGCGT TAG
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Protein sequence | MSLDLMNIAR TGVLASQSQL AITSNNIANA NTAGYNRQVV SQSALDSQRM GNDFYGAGTY VSDVKRVYND YATRELRIGS TAVSETQTTF GKMSELDQLF SQIGKGVPEG LNNFFASMNA LSDIPGDLGM RGSMLTSANQ LADSINQMQG HLDSQMTQTN DQIAAVTTRI NEISKELGNI NRELMKSQGE DMQLLDKQDA LILELSEYAS VNVVPLDSGA KSVMLGGSMM LVSGEVSMQM GTVQGDPYPN ELQITAQSGN KSMIVDATKL GGQLGALVNY RDETLTPSQM EFGQYALGVA DAFNQAQAQG FDLNGQVGAN IFTDINDPSM QIGRVGALSS NTGTANLSVN IDDVGSLTGS SYELKFTAPS TYELKDAASG NITPLTLNGT KLEGADGFSI DIDAGALASG DTFEIRPTSG AAASISVEMT DGKGIAAAGT KITADAANTG NSQVKLVSID DRTDTNFPVT GSELTFEIDP AATPPTFEVF DVDGTSLGAA AAYTPPNISA HGFTFEIDST AATAEKFTFD LSFAEGDNTN MVNMAKLNEA KLMNGGKTTL NDVYENTKFD VGSKTKAAEV AMGSADAIYT QAYTRVQSVS GVNLDEEAAN LMRFQQSYQA SARIMTTANE IFNTLFSSLR
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