Gene Spea_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1336 
Symbol 
ID5661735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1631078 
End bp1631395 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content43% 
IMG OID641235900 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_001501198 
Protein GI157961164 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.156466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTG ATATTAAACA AGTAAATACC CATGCCAATA CTCGTATTGG CATGGGTATG 
AATGCGAAAG GTGCACCGGC TCAAACCGCA CCGTCGGCGC CGGCTCAAAG CGCACAGAAA
ACTGATTCAG TGTCGATTAC GGCGCAGGCT CAGCAAATCC AAAACGTACA GACTAAGATG
GCTGACATGC CTGAAATCGA TCAAAAGAAA GTAGATGCAA TCAAAGCGGC AATAGCTGAA
GGTCGTTATA AAATCGATCC TGAAAAACTG GCAACTAACA TCGCTAGCTT TGAGAATGAT
CTTAAAGATT TAAGTTAA
 
Protein sequence
MAIDIKQVNT HANTRIGMGM NAKGAPAQTA PSAPAQSAQK TDSVSITAQA QQIQNVQTKM 
ADMPEIDQKK VDAIKAAIAE GRYKIDPEKL ATNIASFEND LKDLS