Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1336 |
Symbol | |
ID | 5661735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1631078 |
End bp | 1631395 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641235900 |
Product | anti-sigma-28 factor, FlgM |
Protein accession | YP_001501198 |
Protein GI | 157961164 |
COG category | [K] Transcription [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.156466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATTG ATATTAAACA AGTAAATACC CATGCCAATA CTCGTATTGG CATGGGTATG AATGCGAAAG GTGCACCGGC TCAAACCGCA CCGTCGGCGC CGGCTCAAAG CGCACAGAAA ACTGATTCAG TGTCGATTAC GGCGCAGGCT CAGCAAATCC AAAACGTACA GACTAAGATG GCTGACATGC CTGAAATCGA TCAAAAGAAA GTAGATGCAA TCAAAGCGGC AATAGCTGAA GGTCGTTATA AAATCGATCC TGAAAAACTG GCAACTAACA TCGCTAGCTT TGAGAATGAT CTTAAAGATT TAAGTTAA
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Protein sequence | MAIDIKQVNT HANTRIGMGM NAKGAPAQTA PSAPAQSAQK TDSVSITAQA QQIQNVQTKM ADMPEIDQKK VDAIKAAIAE GRYKIDPEKL ATNIASFEND LKDLS
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