| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1308 |
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| Symbol | |
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| ID | 5661707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1592328 |
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| End bp | 1593515 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235871 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_001501170 |
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| Protein GI | 157961136 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000307899 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCTT GGTGCAAAAC ACTACTAGCA TGCGGCATGA GCATAGGCAT CTTGTCTGCT
TGTTCTTCGA GTGATGTAGA GGAAGATCCA GTTACACCAC TTACTGAGAT AGAAGCCAGC
GTATTTCCAG AAGTAAACTG GAGTGCAAAC GTCGGTAACG GCGTCGGTGA TTACTACTCT
CGCTTACGCC CAGCAGCAAA TTACGGCAAA CTGTTTGTTG CAGACCGTTA CGGTAAAGTT
GAAGCGTTCG ACGAAGTGAC CGGTGAGCGT ATTTGGCAAA ATGATTTTAG CTCTGCATTT
AGAGATAATG CATTAGCTAA AAACAAAGGT GCACGTTTAG CCGGTGGTGT AACAGCGTCA
CGTAACAAGG TATTTGTGGG CGGAGAAAGC GGCCTTCTAG CGGCTTTTGA TGAAGCAACT
GGTGAAGCTG TTTGGCATGT CGTTGCTGGT GGTGAGCTGT TATCGGCACC TACAGTAGGC
GAAGATGTGG TTGTGGTTAA TACCGGTGCG GGTACGTTAG AAGCGTTTGA CGTGGAAGAC
GGAACTCAAC AATGGGTATA TGAAAACCAA CTACCGACCC TAACCCTGCG TGGTACGGGC
GCCGCTTCTT ATGAGGCCGG TGGTTTCTTT GTTGGCACCG CCGATGGTAA AATTGCTGTT
GTGATCAAAA ACAATGGCCA GGCTGCATGG GAGCAGGCTA TTTACACCCC AACGGGAGGC
AATGAGTTCT CACGTATGGC CGATGTAGAT ATGAAGCCAT TGCTTGTAGG TGAAAACCTA
TATGCCGTTA GTTACAACGG TAACTTAGTG TCTATGGAGA TGCGCACTGG TCGTATCGTA
TGGTCACGCA GTTATTCGAG CTTCAATGAG TTAGCTTATT CGGGCGCAAG CCTATTTGTG
GTCGACGATC ACAGTCGTAT TTATTCTGTT GATAGACGAA ATGGTCTAGA GTTATGGAAT
AATGCAGAAC TTGCTAACCG TAATTTAACC GCACCCGTGT CATTTAAAGA TTACGTGGTT
GTGGGTGATT TTGAGGGGTA TCTACACTTC TTAAACAAGT CTGATGGTCA AATCGTTGGA
CGTGTAGAAG TTGATAGCTC AGGTTTATAC AGTCAGCCAT TAGTTGTTAA TGACAACCTA
TATGTGCAGA CTCGTGGTGG AAAAGTGGTT CGAGTCACAC TTCCGTAA
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| Protein sequence | MKSWCKTLLA CGMSIGILSA CSSSDVEEDP VTPLTEIEAS VFPEVNWSAN VGNGVGDYYS
RLRPAANYGK LFVADRYGKV EAFDEVTGER IWQNDFSSAF RDNALAKNKG ARLAGGVTAS
RNKVFVGGES GLLAAFDEAT GEAVWHVVAG GELLSAPTVG EDVVVVNTGA GTLEAFDVED
GTQQWVYENQ LPTLTLRGTG AASYEAGGFF VGTADGKIAV VIKNNGQAAW EQAIYTPTGG
NEFSRMADVD MKPLLVGENL YAVSYNGNLV SMEMRTGRIV WSRSYSSFNE LAYSGASLFV
VDDHSRIYSV DRRNGLELWN NAELANRNLT APVSFKDYVV VGDFEGYLHF LNKSDGQIVG
RVEVDSSGLY SQPLVVNDNL YVQTRGGKVV RVTLP
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