| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1306 |
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| Symbol | hisS |
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| ID | 5661705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1590407 |
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| End bp | 1591681 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235869 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001501168 |
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| Protein GI | 157961134 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000890962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCAAAAC AGATCCAAGC GATTCGCGGA ATGAATGACA TTCTGCCTAC CCAAAGTCCT
TTATGGCAAA AACTTGAAAC CGTATTACGT GACACTGTTG GGTCATATGG TTACAGCGAA
ATTCGTACTC CTATCGTTGA AAGTACAGAT CTCTTTAAGC GCTCTATCGG TGAAGTAACT
GATATCGTTG AAAAAGAGAT GTATACCTTT GAAGATCGAA ACGGTGACAG CTTAACCCTA
CGTCCAGAAG GCACTGCCTC TACGGTACGT GCGGGTAACG AACACGGTTT GCTATACAAC
CAAGAGCAGC GTCTTTGGTA TATGGGACCA ATGTTCCGCC ACGAACGCCC ACAAAAAGGC
CGTTACCGTC AATTCCACCA ATTTGGTGTT GAAGTTTACG GCATTCCTAC TGCCGATATC
GACGCTGAAG TCTTGATGCT ATCAGCCAAG CTTTGGGAAA AACTCGGTAT TACTGAGCAT
GTGACCCTAG AGCTAAATAC TTTAGGTGAT ACTGAAGAGC GCGCCGCATA CCGTGATGCC
TTGATTGCTT TCTTAGAGCA ACACAAAGAG GTGTTAGACG AAGATAGCCA GCGCCGCATG
TACAGTAACC CACTGCGCGT TTTGGACTCT AAGAATGCCG ATGTACAGGC ACTTCTAGCC
GATGCGCCAG TGCTAATGGA TTATTTCGGT GAAGACACGC GTTCACATTT TTCACATTTA
TGTGAACTCT TAGAGGCTGT CGGCATCCAA TACACAATCA ATCCTCGCCT AGTGCGCGGT
TTAGATTATT ATAATCGCAC GGTTTTTGAG TGGGTGACAT CGAGCCTAGG TTCGCAAGGT
ACAGTATTGG CCGGTGGTCG TTACGATGGT CTTGTTGGCC AGCTAGGTGG TAAGCCAACA
CCGGCAGTCG GTTTTGCAAT GGGCCTTGAG CGCATCGTAT TACTACTGCA AACACTTGAG
CTCGACAAAG ATATCGGTCC AGCTGTTGAC GTATACGTGA CAGCGATGGG TGATAACTGC
AAAGTTGAAG CGATTAAGAT TGCGCAAGAA CTAAGAGCTA GCTTGCCAAC TGCTAAAGTG
ATGAGCCATT GTGGTGGCGG TAACTTTAAG AAGCAGATGA AGCGAGCCGA TAAGAGCGGT
GCCTGCGTTG CACTGGTGAT TGGTGAAGAT GAACTTGCCA ATAATCAAGT TGCAGTGAAA
CACCTTCGCG AAGATAAAGC ACAAGAATTA GTTGCCCGTG ATGCGTTGGC GACATATATT
GCAGAGCTGA TTTAA
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| Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKLETVLR DTVGSYGYSE IRTPIVESTD LFKRSIGEVT
DIVEKEMYTF EDRNGDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFHQFGV EVYGIPTADI DAEVLMLSAK LWEKLGITEH VTLELNTLGD TEERAAYRDA
LIAFLEQHKE VLDEDSQRRM YSNPLRVLDS KNADVQALLA DAPVLMDYFG EDTRSHFSHL
CELLEAVGIQ YTINPRLVRG LDYYNRTVFE WVTSSLGSQG TVLAGGRYDG LVGQLGGKPT
PAVGFAMGLE RIVLLLQTLE LDKDIGPAVD VYVTAMGDNC KVEAIKIAQE LRASLPTAKV
MSHCGGGNFK KQMKRADKSG ACVALVIGED ELANNQVAVK HLREDKAQEL VARDALATYI
AELI
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