Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1304 |
Symbol | |
ID | 5661703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1588165 |
End bp | 1589130 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641235867 |
Product | hypothetical protein |
Protein accession | YP_001501166 |
Protein GI | 157961132 |
COG category | [S] Function unknown |
COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.358392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG AACAGAATCA AGAGCCCAAT GTAGATAATG AAAGCCTAGT GGATGAGCCG ACGCTCACAC TGGGCGTTTT GCTAAAAACA GCCCGCGAAA ATAAGGGGCT GTCGATAGAG GCGATTGCAG CACAATTGCA TTTACGTCCC ACTATCGTGC AAGAGATTGA GGCCGATAAT TTAGAGGCAG TTGGCGCAGC AACTTATGTG CGCGGCTATG TGAAAAACTA CGCTCGGGCA GTGCAGGCCG ACCCGTTTAC CGTACAAGAG TGCTTAAATA AGCAACTTGC GAATGACGAT GAGCCATCGA TGCAGAGTTT TTCTCGCAAG ACCACACGTC AGGCTCGTGA TGGCCGCTTG ATGGCGTTGA CCTATCTTAT CGTGTTTGTG CTGTTAGCAT TAATGGTCTG GTGGTGGTTC CAAAAGTCTT CGCTAGAGAC TGCGGTTGAT TATTCACAAC CAACGGCAGA AGAGGTGGCA GCATCGGTAC AGCTACCTGA TTCGAGCCCT GCTGAGCCAT TGCTGGTTGC TCATCAAGAT TCTGCTGTTG AACAGTTCTC AGAAGCTGTT GATGAGGCAT CGCAACTTGC GAATGAGGGC AGCCAAGCTG AAACTGATTT TACAGCGGTG CTCTCTGAGC CTGTTTTAGC TGAAACGGTT CAATCAGATA CTTCTTCTGC AGACATAGCA CCGTCTGTTA CAACAGATGC CACAGCAGGC TCATCGCTAA AATTAAGCCT AACAGGAGAC TGCTGGATTA AAATCGCCGA TGCGACAGGC AAGACCCTAG TCAGCGATCT TAGGAAAGCC GGTAGCGAGA TTAACTTAGT TGGGGCAGAG CCGTTTTCGG TGACGTTAGG CGCCCCTCAA GTAGTCAATA TCCAACTAAA TGGTAAAGCG ATTAGTTTGG AGCAGTATCC TAGCGGTAAG GTGGCGAGAT TAACGTTGCC ACTCGCAGGA CAATAA
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Protein sequence | MKNEQNQEPN VDNESLVDEP TLTLGVLLKT ARENKGLSIE AIAAQLHLRP TIVQEIEADN LEAVGAATYV RGYVKNYARA VQADPFTVQE CLNKQLANDD EPSMQSFSRK TTRQARDGRL MALTYLIVFV LLALMVWWWF QKSSLETAVD YSQPTAEEVA ASVQLPDSSP AEPLLVAHQD SAVEQFSEAV DEASQLANEG SQAETDFTAV LSEPVLAETV QSDTSSADIA PSVTTDATAG SSLKLSLTGD CWIKIADATG KTLVSDLRKA GSEINLVGAE PFSVTLGAPQ VVNIQLNGKA ISLEQYPSGK VARLTLPLAG Q
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