Gene Spea_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1304 
Symbol 
ID5661703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1588165 
End bp1589130 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID641235867 
Producthypothetical protein 
Protein accessionYP_001501166 
Protein GI157961132 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.358392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG AACAGAATCA AGAGCCCAAT GTAGATAATG AAAGCCTAGT GGATGAGCCG 
ACGCTCACAC TGGGCGTTTT GCTAAAAACA GCCCGCGAAA ATAAGGGGCT GTCGATAGAG
GCGATTGCAG CACAATTGCA TTTACGTCCC ACTATCGTGC AAGAGATTGA GGCCGATAAT
TTAGAGGCAG TTGGCGCAGC AACTTATGTG CGCGGCTATG TGAAAAACTA CGCTCGGGCA
GTGCAGGCCG ACCCGTTTAC CGTACAAGAG TGCTTAAATA AGCAACTTGC GAATGACGAT
GAGCCATCGA TGCAGAGTTT TTCTCGCAAG ACCACACGTC AGGCTCGTGA TGGCCGCTTG
ATGGCGTTGA CCTATCTTAT CGTGTTTGTG CTGTTAGCAT TAATGGTCTG GTGGTGGTTC
CAAAAGTCTT CGCTAGAGAC TGCGGTTGAT TATTCACAAC CAACGGCAGA AGAGGTGGCA
GCATCGGTAC AGCTACCTGA TTCGAGCCCT GCTGAGCCAT TGCTGGTTGC TCATCAAGAT
TCTGCTGTTG AACAGTTCTC AGAAGCTGTT GATGAGGCAT CGCAACTTGC GAATGAGGGC
AGCCAAGCTG AAACTGATTT TACAGCGGTG CTCTCTGAGC CTGTTTTAGC TGAAACGGTT
CAATCAGATA CTTCTTCTGC AGACATAGCA CCGTCTGTTA CAACAGATGC CACAGCAGGC
TCATCGCTAA AATTAAGCCT AACAGGAGAC TGCTGGATTA AAATCGCCGA TGCGACAGGC
AAGACCCTAG TCAGCGATCT TAGGAAAGCC GGTAGCGAGA TTAACTTAGT TGGGGCAGAG
CCGTTTTCGG TGACGTTAGG CGCCCCTCAA GTAGTCAATA TCCAACTAAA TGGTAAAGCG
ATTAGTTTGG AGCAGTATCC TAGCGGTAAG GTGGCGAGAT TAACGTTGCC ACTCGCAGGA
CAATAA
 
Protein sequence
MKNEQNQEPN VDNESLVDEP TLTLGVLLKT ARENKGLSIE AIAAQLHLRP TIVQEIEADN 
LEAVGAATYV RGYVKNYARA VQADPFTVQE CLNKQLANDD EPSMQSFSRK TTRQARDGRL
MALTYLIVFV LLALMVWWWF QKSSLETAVD YSQPTAEEVA ASVQLPDSSP AEPLLVAHQD
SAVEQFSEAV DEASQLANEG SQAETDFTAV LSEPVLAETV QSDTSSADIA PSVTTDATAG
SSLKLSLTGD CWIKIADATG KTLVSDLRKA GSEINLVGAE PFSVTLGAPQ VVNIQLNGKA
ISLEQYPSGK VARLTLPLAG Q