Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1303 |
Symbol | |
ID | 5661702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1587365 |
End bp | 1588165 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641235866 |
Product | type IV pilus biogenesis/stability protein PilW |
Protein accession | YP_001501165 |
Protein GI | 157961131 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.682058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTTAA AAATGAATCA GAGTAAGCTG GTATTGCCGC TGGTATTAAT CCTGTCGTCA GTGATGACAA CAGGGTGTGT TACCCAAGAT ACCTATGCGG GTACCGATAC GCCAGTCTCT GAAAGAAAAG TGGATAAAGT TGCCGCTGCA CGTCAGCGAA TACAACTTGG TCTGACCTAT CTACAAAAAG GCAATAGTGA ACAAGCCAAA GCCAACCTCG ATCGAGCATT GGCTTTTGCA CCCAATTTGG AAGAAGTGCA CATTGCTTTT GCTTATTACT ACCAGTCTGT CGGTGAATTA GAAAAAACAG AGCAAGCATA CAGAGAAGCG ATCGACTCAA GTGATGCAAC GGGTGATTCA TACAATAACT TCGGTGCATT TTTGTGTCAG CAAGGTAAAT ATGCTGAGTC TGAGAAGATG TTTCTAAAAG CTGTTGACCA GCCTCTGTAT ACCCGTTCGG CTTCAACCTA TGAAAACCTC GGTATTTGTA GCCGTAAAGC CGGACAAATG AGTAAAGCGC AGTCTTATTT TGCGATGGCA CTAAACTACG ATCCTAGAAG ACGTACCTCA CTAATCGAGC TGACAGAGAT CGATTATGAA GAGGGCAAAT ATGCCGAGGC GAGAGAACAA CTTTCTCGCT ATCATAGAGT GGCTGCAGAA TCTGCAGGCA GTTTGGCACT CGGGATTAAA ATTGAACAAG GTTTGAATGA CCAAGAAGCG GTTAGACGGT TCGGTATCTT ACTACTGGCA AAGTTTCCGC AGTCTGTTCA GGCCAAAGAA TATCGGGCTA GTATGCATTA A
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Protein sequence | MGLKMNQSKL VLPLVLILSS VMTTGCVTQD TYAGTDTPVS ERKVDKVAAA RQRIQLGLTY LQKGNSEQAK ANLDRALAFA PNLEEVHIAF AYYYQSVGEL EKTEQAYREA IDSSDATGDS YNNFGAFLCQ QGKYAESEKM FLKAVDQPLY TRSASTYENL GICSRKAGQM SKAQSYFAMA LNYDPRRRTS LIELTEIDYE EGKYAEAREQ LSRYHRVAAE SAGSLALGIK IEQGLNDQEA VRRFGILLLA KFPQSVQAKE YRASMH
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