Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1302 |
Symbol | |
ID | 5661701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 1586212 |
End bp | 1587333 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641235865 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_001501164 |
Protein GI | 157961130 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.563776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AGAAGATCAA TTTATTGGAT CTTGATCGTA AAGCATTAAG AGCGCTATTT ACCGAAATGG GTGAAAAGCC ATTCCGTGCT GATCAATTGA TGAAATGGAT TTATCATTTT GGCGTTAGTG ACTTCGAAGA AATGACGAAC ATTAACAAAG TATTGCGCGC TAAACTTGCC GCGAAATGCG AAATCGTCGC CCCTGAAATT TCAAGTTATC AAAAGTCTGT TGATGGCACA ATTAAGTTCG CTATCAACGT TGGTGATGGT CAAGAAGTTG AAACGGTTTA TATCCCTGAA GATGACCGTG CCACGCTATG TGTATCGTCG CAAGTGGGTT GTGCCCTAGA GTGTACTTTC TGCTCAACGG CGCAGCAAGG CTTTAACCGT AACCTAACGG TTGCAGAGAT CGTAGGCCAA ATTTGGCGCG TTGCCGACTT TATCGGTTTC GTGAAAGACA CAGGTGAACG TCCAATCACA AACGTTGTGA TGATGGGCAT GGGTGAACCA TTACTCAACT TAAAGAATGT GATCCCAGCG ATGGATATCA TGTTGGATGA TTTTGGTTTC AGCCTATCTA AGCGCCGTGT AACCTTATCG ACATCAGGTG TTGTACCAGC TCTTGATAAA TTGGGTGATG TACTAGACGT CGCATTAGCC GTGAGTATTC ACGCACCTAA TGATGAGCTG CGTGACGTAT TGGTTCCAGT TAACAAAAAA TATCCACTAG AAGAGTTCTT AGGGGGTATT CGTCGCTATA TCGCTAAATC TAATGCTAAC CGCGGTCGCG TCACCGTTGA GTACGTCATG CTAGATCATA TTAATGACAG TACAGATCAG GCTCATGAGT TAGCTAAGCT GATGAAAGAT ACGCCGTGTA AGGTTAACCT TATTCCGTTT AACCCATACC CGGGTTCTCC ATATGGGCGT TCATCGAACT CTCGTATCGA TAGATTCTCG AAAGTCTTGA TGGAATATGG CCTAACCGTT ATCGTTCGTA AGACTCGTGG TGACGATATC GATGCTGCAT GTGGTCAGTT AGCGGGTGAC ATTCGCGATA GAACCAAACG TTTAGCAAAA AAACAAATGC AACAAAATCA AATTTCAGTC ACAATAAACT AA
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Protein sequence | MSEKKINLLD LDRKALRALF TEMGEKPFRA DQLMKWIYHF GVSDFEEMTN INKVLRAKLA AKCEIVAPEI SSYQKSVDGT IKFAINVGDG QEVETVYIPE DDRATLCVSS QVGCALECTF CSTAQQGFNR NLTVAEIVGQ IWRVADFIGF VKDTGERPIT NVVMMGMGEP LLNLKNVIPA MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDVLDVALA VSIHAPNDEL RDVLVPVNKK YPLEEFLGGI RRYIAKSNAN RGRVTVEYVM LDHINDSTDQ AHELAKLMKD TPCKVNLIPF NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK KQMQQNQISV TIN
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