Gene Spea_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1302 
Symbol 
ID5661701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1586212 
End bp1587333 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content43% 
IMG OID641235865 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_001501164 
Protein GI157961130 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.563776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AGAAGATCAA TTTATTGGAT CTTGATCGTA AAGCATTAAG AGCGCTATTT 
ACCGAAATGG GTGAAAAGCC ATTCCGTGCT GATCAATTGA TGAAATGGAT TTATCATTTT
GGCGTTAGTG ACTTCGAAGA AATGACGAAC ATTAACAAAG TATTGCGCGC TAAACTTGCC
GCGAAATGCG AAATCGTCGC CCCTGAAATT TCAAGTTATC AAAAGTCTGT TGATGGCACA
ATTAAGTTCG CTATCAACGT TGGTGATGGT CAAGAAGTTG AAACGGTTTA TATCCCTGAA
GATGACCGTG CCACGCTATG TGTATCGTCG CAAGTGGGTT GTGCCCTAGA GTGTACTTTC
TGCTCAACGG CGCAGCAAGG CTTTAACCGT AACCTAACGG TTGCAGAGAT CGTAGGCCAA
ATTTGGCGCG TTGCCGACTT TATCGGTTTC GTGAAAGACA CAGGTGAACG TCCAATCACA
AACGTTGTGA TGATGGGCAT GGGTGAACCA TTACTCAACT TAAAGAATGT GATCCCAGCG
ATGGATATCA TGTTGGATGA TTTTGGTTTC AGCCTATCTA AGCGCCGTGT AACCTTATCG
ACATCAGGTG TTGTACCAGC TCTTGATAAA TTGGGTGATG TACTAGACGT CGCATTAGCC
GTGAGTATTC ACGCACCTAA TGATGAGCTG CGTGACGTAT TGGTTCCAGT TAACAAAAAA
TATCCACTAG AAGAGTTCTT AGGGGGTATT CGTCGCTATA TCGCTAAATC TAATGCTAAC
CGCGGTCGCG TCACCGTTGA GTACGTCATG CTAGATCATA TTAATGACAG TACAGATCAG
GCTCATGAGT TAGCTAAGCT GATGAAAGAT ACGCCGTGTA AGGTTAACCT TATTCCGTTT
AACCCATACC CGGGTTCTCC ATATGGGCGT TCATCGAACT CTCGTATCGA TAGATTCTCG
AAAGTCTTGA TGGAATATGG CCTAACCGTT ATCGTTCGTA AGACTCGTGG TGACGATATC
GATGCTGCAT GTGGTCAGTT AGCGGGTGAC ATTCGCGATA GAACCAAACG TTTAGCAAAA
AAACAAATGC AACAAAATCA AATTTCAGTC ACAATAAACT AA
 
Protein sequence
MSEKKINLLD LDRKALRALF TEMGEKPFRA DQLMKWIYHF GVSDFEEMTN INKVLRAKLA 
AKCEIVAPEI SSYQKSVDGT IKFAINVGDG QEVETVYIPE DDRATLCVSS QVGCALECTF
CSTAQQGFNR NLTVAEIVGQ IWRVADFIGF VKDTGERPIT NVVMMGMGEP LLNLKNVIPA
MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDVLDVALA VSIHAPNDEL RDVLVPVNKK
YPLEEFLGGI RRYIAKSNAN RGRVTVEYVM LDHINDSTDQ AHELAKLMKD TPCKVNLIPF
NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK
KQMQQNQISV TIN