Gene Spea_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1293 
Symbol 
ID5661692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1577807 
End bp1578631 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content44% 
IMG OID641235856 
Producthypothetical protein 
Protein accessionYP_001501155 
Protein GI157961121 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCGA TCTTTCTTAT CCTACTGTTC AGTATTAGCG CCATAGCATG GATTGCTAGT 
GCGTCATGGC GTGCTCGTCG TCGACGGAAA TTAATTAGCC AACAGCCTTT CCCCCATGAA
TGGCGAGAGA TCTTAAAACG TCGTATTCCT TTTTTTAGGA CATTACCCGC AGATCTGCAG
CTACAACTGA AGAAACACAT TCAAGTATTT ATCGCAGAAA AACGCTTTGT CGGCTGCGAT
GATTTAAAAA TTACCGATGA TATTCGTGTC ACGGTGGCCG CTCAAGCCTG TTTATTATTA
CTCAATAGAA CAACCGATTT TTATCCAAGA TTAAAAGAGA TCCTCATTTA TCCATCGGTA
TTTATTGTCG AAAACCAGCA GCATCATGGT GCAGGAGTGG TGTCAGAGCA GCGAAGAGTC
CTATCGGGTG AATCATGGCA ACATGGCCGT GTAATATTGT CTTGGCAAAC CACTAAGCAC
GACGCCGCTG TACCTGATGA TGGCAGTAAT GTAGTCATCC ATGAGTTTGC CCACCAATTA
GATCAAGAAG ATGGCAGTGC AAACGGGGCT CCTATTCTGC AACATAGCAA GGATTACGCT
TCTTGGTCTG AAGTATTAAT GCAGGAATTT CAAGCGTTAG TAAGGGCGAG TCAATACGGT
GAACATTCAC TTTTTAGCTA TTATGGCGCC ACTAACCCAG CGGAATTTTT TGCCGTTGTG
AGTGAAGTTT TTTTCGAGCA GCCCCATGAC TTTATCGCAT TACATCCAGC GCTTTACCGA
GAGCTAAGCG CTTTTTACCA GCTCGATCCG GTGAATTGGC ATTAA
 
Protein sequence
MLAIFLILLF SISAIAWIAS ASWRARRRRK LISQQPFPHE WREILKRRIP FFRTLPADLQ 
LQLKKHIQVF IAEKRFVGCD DLKITDDIRV TVAAQACLLL LNRTTDFYPR LKEILIYPSV
FIVENQQHHG AGVVSEQRRV LSGESWQHGR VILSWQTTKH DAAVPDDGSN VVIHEFAHQL
DQEDGSANGA PILQHSKDYA SWSEVLMQEF QALVRASQYG EHSLFSYYGA TNPAEFFAVV
SEVFFEQPHD FIALHPALYR ELSAFYQLDP VNWH