| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1290 |
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| Symbol | |
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| ID | 5661689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1573642 |
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| End bp | 1575306 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235853 |
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| Product | malate synthase |
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| Protein accession | YP_001501152 |
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| Protein GI | 157961118 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAG TTTTGGGAGA TAAAATGATG ACAGAGCAAT TAACAGCGCT AGATACTTGC
GACGCACTGG TATCGAGTCA AGAGTTACAG ATAAAAGGGC AAGCTGTTGC AGGGCAGGAG
CAGGTATTAA CTGAAGGCAC ACTGTGCTTG TTAAAGGCAT TGTGTAAGCA GTTTGCGCCA
CAGGTGCCAG ATTTACTTGC TAATAGGCAG GCAAAGCAAA AGCGTATTGA TTTAGGTGAG
TTGCCCGATT TTTTGGAGGA GACCAAGGAG ATCCGTCAAG GGAATTGGCA GATCCGAGGT
ATTCCTGAAG ACTTACAAGA TAGGCGCGTA GAGATCACCG GGCCTGTTGA GCGCAAGATG
GTGATCAATG CGCTTAATGC TAATGCCAAA GTGTTTATGG CCGATTTTGA GGATTCACTG
GCGCCAAGCT GGCACAAGGT GGTGCAAGGT CAAATCAACC TGCGGGATGC GGTGAACGGT
GATATTGGCT ATACGGCGCC AGAAACAGGC AAGCATTATT CATTAAATGA CAATCCTGCG
GTGCTTATTT GCCGAGTCCG TGGTCTACAT ATGCAAGAGC AGCATGTGCA GTTTGGCGGC
GTCGCCATTC CTGCTGGCTT GTTCGATTTT TGTGTCTATT TCTACAATAA CTACTGTAAG
TTATTGAGTA AGGGCAGCGG GCCGTATTTT TATATTCCTA AGCTAGAAAG CCATCTAGAG
GCCAAGTGGT GGGCAAGAGT GTTTGCTTTT GTTGAGGCGC GTTTCTGTTT ACAGCCTGGC
ACCATAAAAT GTACCTGCCT AATTGAAACC CTACCCGCCG TCTTTGAGAT GGATGAGATC
TTGTATGAAC TGCGCTCTAA CATCGTTGCG CTTAATTGCG GTCGTTGGGA CTATATATTT
AGCTATATTA AAACCCTAAA TAACCATAGC GACAGAGTGC TGCCCGACAG GCAGTCGGTC
ACCATGGATA AGCCATTTTT AAGTGCTTAC TCTCGCTTAT TGATCAAGAC CTGCCACAAG
CGTGGTGCGT TAGCTATGGG CGGCATGGCA GCCTTTATTC CAGCAAAAGA TACTGAGCTC
AATCAACAAG TGCTAGCTAA GGTTAAACAG GATAAGCAAC TCGAAGCGCG AAATGGCCAT
GATGGCACTT GGGTAGCACA TCCTGGGCTG GCCGATACTG CGATGGCAAT TTTTAATGAA
TACATAGGTG AAGACCATAT TAATCAACTA CACATTACCC GTGATGTTGA CGCCCCTATT
CATGCTAGAG AGTTACTCGA ACCTGCAAAG GGGCAATGTA CAGAAGCTGG CATGCGCCTC
AATATTAGAA TTGCACTGCA ATACATAGAG TCGTGGATTA ACGGCAATGG CTGCGTGCCT
ATCTATGGCT TAATGGAGGA TGCGGCTACG GCTGAAATAT CTCGCACTTC AATTTGGCAG
TGGATTAAGC ATCGTCAGCA GCTTACCTCT GGGGCTGTGG TCACTAAGGC ACTATTTAAG
GATATGTTGG TAGAAGAGCT CGCCCACGTT AAAGATGAGG TAGGGGCCGA TCGTTTTACT
CACGGCAGTT TTACTCAGGC CGCAGTCTTG CTAGAGCAGA TCACTACAGC AGACGAGTTG
GTCGATTTTT TAACTGAGCC GGGATATCAA CTGTTGGTGG AGTAA
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| Protein sequence | MSKVLGDKMM TEQLTALDTC DALVSSQELQ IKGQAVAGQE QVLTEGTLCL LKALCKQFAP
QVPDLLANRQ AKQKRIDLGE LPDFLEETKE IRQGNWQIRG IPEDLQDRRV EITGPVERKM
VINALNANAK VFMADFEDSL APSWHKVVQG QINLRDAVNG DIGYTAPETG KHYSLNDNPA
VLICRVRGLH MQEQHVQFGG VAIPAGLFDF CVYFYNNYCK LLSKGSGPYF YIPKLESHLE
AKWWARVFAF VEARFCLQPG TIKCTCLIET LPAVFEMDEI LYELRSNIVA LNCGRWDYIF
SYIKTLNNHS DRVLPDRQSV TMDKPFLSAY SRLLIKTCHK RGALAMGGMA AFIPAKDTEL
NQQVLAKVKQ DKQLEARNGH DGTWVAHPGL ADTAMAIFNE YIGEDHINQL HITRDVDAPI
HARELLEPAK GQCTEAGMRL NIRIALQYIE SWINGNGCVP IYGLMEDAAT AEISRTSIWQ
WIKHRQQLTS GAVVTKALFK DMLVEELAHV KDEVGADRFT HGSFTQAAVL LEQITTADEL
VDFLTEPGYQ LLVE
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