Gene Spea_1282 details

Gene Information

• Locus tag: Spea_1282
• Symbol: smpB
• ID: 5664704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 1566605
• End bp: 1567099
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 641235845
• Product: SsrA-binding protein
• Protein accession: YP_001501144
• Protein GI: 157961110
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0727299
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTAAGA AAAACGCAAA AAATTCAAAG AACAGTTCAG CTTCCATTGC ACGCAATAAG 
CGCGCAACTT TTGACTACAA GTTTGAAGAG AAGCTAGAAG CAGGCTTATC CCTAATGGGA 
TGGGAAGTGA AGTCTATTCG CATGGGCAAG GTAAACTTGT CTGAGAGCTA TGTGTTTCTA 
AGAGAAGGCG AAGCTTATCT TTTTGGTTGC ACCATCGCAC CACTTAATAC TGCATCTTCC 
CATGTAGTAT GTGACCCGCT ACGCTCGCGC AAGCTACTAC TAAAACGTAA AGAGCTTGAT 
AAACTTCAAG GCTTAGTTGA CCGTAAAGGT TACTCAATCG TACCTATCTC TATGTATTGG 
CAGAAAGGCG CTTGGGTTAA AATTGAAATC GGTTTAGGTA AAGGTAAGAA AGAACACGAT 
AAGCGCGACG ATACTAAAGA TCGCGAATGG CAAATTGAAA AGGCTCGTAC CATAAAGAAG 
GCGGTACAGC AGTAA 

 

Protein sequence

MAKKNAKNSK NSSASIARNK RATFDYKFEE KLEAGLSLMG WEVKSIRMGK VNLSESYVFL 
REGEAYLFGC TIAPLNTASS HVVCDPLRSR KLLLKRKELD KLQGLVDRKG YSIVPISMYW 
QKGAWVKIEI GLGKGKKEHD KRDDTKDREW QIEKARTIKK AVQQ