| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1273 |
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| Symbol | |
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| ID | 5661672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1555239 |
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| End bp | 1558805 |
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| Gene Length | 3567 bp |
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| Protein Length | 1188 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235835 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_001501135 |
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| Protein GI | 157961101 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATC ATAATACACC TTCAACACCA CCAGCCAAGC GGGAGGTACG CGACCAGATG
GTCGATGCGT TGCGTCGAGA GCTGATGGGG CCCTGGCATC CAACGGATGA CACGGATCCA
AGTGAAGAGT TTCCAACAGC GCGCTATATT GTCGGCAGGC TTGCTCCACA GGACTTCGAG
ATTGATGTCG TGGAGAATGA CGCTTTGCCT ACTGGAGATA GTGACGATGG GGAAACGGGT
GAAGCGAGTT TTGAACCACC GCAAGTGCTT GGCTTTATGC CATCTTCAAT GGGCTTGTCT
TTTGTTATCA ATGATACCTG CGATAAAGTC GATGTGTACA TCGAGTGGGG ACAATATTAC
CGTGCTGAAG AGGCTCCTGA ACGCAATGAG GTTGGGGACG GTTACGATGA AGATGAGCGA
GAATGGAATA GCTCCCAGCG TTCATTATTC ATCTGGCGAA GAGAGTCTTG CAAAGGAACA
GTGCGTGGTC TTGACCTGTC AAAAAAAGGG CCGATAACCG AAGTAAAGCT TCATCCTAAA
TTCGCGCCGG CAGATGTTAC TGTTGAAGGC CTAGATGAAG CTGAAGTTTG CATACAAGGT
ATTGTTTATG AGATCCACGG TCAGCGTGCT GTGAGTCTAT TTCTAGTGAA TCAGCGCCAA
AAAGGCGACC CAAAGGATTC AGAAAAAGAT AAGCAGTTCC TTATGCAGGC GCAGATGGAA
GTTCGAGCCA GTGATGGCAG TGCAGTCTTT CTGGCTAAAG ATGATATTGA ATTGGAGCAT
GATGGTTCAC AAGACCCTGA GGCGCAAGTC AATAATTTGC TTTATCGCCA TGCCCGCGAA
TTTGCAACCG GACATGGTGT TGCCGCTGAA TGGGATGGCC TCACGCCAGA TGGTAAAAGC
GTCTCCAGTA TTCGTACCGA GTTTATCCCA TCGTTCGAAG TGCCTAAGGT GATTGCTGCC
AACGATATTG CTGGTGGGGC AACACTGGAT ATGATGGCGC TGGCTAAACT GAACGACCCT
GACGCATTAT TCAATGCAAT CGAACCTCTT GTAAAAAAAT ACGAAGATTG GATTGAGGAC
CGCCGTCTTG AAGCTAATGC TCCTGAAATC AAGGATCATG CTCTGCACTA CGAGGCGGCA
GGGATTCAGT TAGATAACTG TAAGAACGCA GCAACCCGTA TGCGGAAAGG CCTAGAGTTG
TTAAAGAGTA ATCCTAAGGC ACGGACTGCA TTTTGTTGGG CAAATGAGGC CATGGCCGAT
CAACGAGTTC ATTCCATTTG GGCGAAAGAT CATAAAGCTG GAGAGAAAAG AAAGGATATT
GCTGAATACT GGAATAAAAG AAATCACACT TGGCGTCCGT TCCAGCTTGG TTTCTTTTTG
CTAAATTTGG TGGGTGTTGC AGACGATGAA AGTGAAGACC GTGCTTTGGT TGATCTGCTC
TGGTTCCCAA CGGGTGGTGG TAAGACGGAG GCCTACTTAG GCCTTGCAGC ATTTACATTG
TTTTATCGTA GATTAGAAGG TGATCGCGAT GGAATGGAAG CCGGTGCTGG CGTGTCGGTT
ATCATGCGTT ATACATTACG GTTGTTAACG GTTCAGCAAT TTCAACGTGC CGCAGCTCTG
GTGTGTGCTT GTGAGGTAAT TCGACGACGC GAAAACCTAT TGGGTAAAGA GCCATATCGT
ATTGGCCTTT GGGTGGGAGA TAAAACTGCA CCTAACCGCT TCGTTGATGC TAAGAAAGCG
ATAGAGGATC TTAAATCAAA AAATTACACA CACGGAGGCA GTCCGGTTCA GCTATTAAAC
TGTCCTCGGT GTGGTGAGGC TTTAGCTGAT GATAGGGGGA TTCCTAACGG AGCGGCTTAT
ACAGTCGATA GTGATGCTCA AAGAATTCGT GTTCTCTGTC CTAATTTTCG CTGCGAGATG
TCACAAAAGA AATCAGCTGG TGAAGGTGTA CCTGTAGTTG TTGTTGATGA GGAGCTTTAC
CGAACCTGTC CTTCGATTAT CATTGCAACG GTCGATAAGT TTGCACGAAT GCCATTTGAA
GGACGAACTC AAGCCTTCTT TGGTATTCGA GATCGCTATA GTCCCACTCT TGGGCATATC
ACTCCTGCTG ATGGAGTAAA GCCTGGTGGA AAGTTATGTA AAGATGCCAG AAAGGCCAAA
AGGCTATTGC CGCCTGAACT TATAATTCAA GATGAATTAC ATTTGATCTC CGGTCCACTC
GGCACAATGG TAGGGCTTTA CGAAACCGCC ATAGATTTTT TAAGTCGAGT GCAAAAAGAG
TCAGGTGTGA CGGTAAGATC TAAGGTCATA GCATCGACGG CGACGATTCG TCGCGCCGCT
CAGCAAGTTA GGCAATTGTA TGATCGTGAC CTTCAAGTGT TCCCACCTAG CGCCCTTAGC
TCTAAAGATT CGTTCTTCGC TCGTGAAATT GCAACTCACG ATGAAAACGG TCATGCAGGA
GACTTTGAAG CTGGCCGCCT ATACATTGGG GCAAACGCTA GTGGTTCGAG CTCTAAAACA
CTTCTTGTAA GGGTTTATGC AGGTTTATTA CATGCCGGAC TTGATCATCT AGTTGACCCA
GTCATTGCTC AATCTGGAGA TCCTTACGGG ACCTTGGTTG GCTACTTCAA TAGTATGCGC
GCACTGGGTG GTGCTAAACG TCTGGTGGAA GATGACGTAA CGCTTAGGCG ACTGTATTAT
CTTGCAAGGC GAGATCAGTC CGCATTGAAA AGAGAAAAAC GAAACCAACG CTATATTAGT
GAACCTAAAG AACTTACAAG TCGATTAGCG TCTTGGCAGA TCCCACCTTT ACTTAAACGA
ATGGATGTGA CATTTCCTCG GCCCGTTAAG GGGGAGAAGA ATAAGGTCTA TCCAGTGGAT
GTTCTGCTCG CAACAAATAT GATTTCGGTG GGTGTGGATA TCGACAGGCT AGGTCTTATG
GTCTGTACGG GGCAACCTAA AACGACTGCA GAGTATATCC AGGCGACTAG TCGCGTGGGA
CGTCAACATC CAGGACTTGT AGTAACAATG TATAACTGGG TTTCACCACG TGACATTTCT
CATTATGAGC GATTCAAGAG TTATCACGCT GCACTTTACC GTTATGTAGA GCCTATTAGT
GTAACTCCGT TTTCTTCTCG AGCGTTAGAT CGTGGTTTGC GCGGCATGTT TGGAGCCACA
CAGCGACTTG GCCAAACGCA GGCGTCTGAG GAGTTTTCTG CTAATCAGTT TGATCCTACA
AACCCTTGGG CAAAAGCCAT GATTGAGGGG ATTGCGGAAC GAGCGACGAA TCTAACATCT
CACTCACGTC AAGGTGTTGC CCAGGGGGAC CACGTAAAAA GAGTATTGAA TGAACAGAGT
GATAGCTGGA GTCAGCTACA AAACGCATCT GTTTCATATT TCAAGAAAAA GTCGACTAAG
AATAAGGATG AGGATGCAGC ACATCATCGT CTCTTTCGTA ATTTGGGGGA GGCCAAAGGT
GGGAAGTGGT CGGCACCGAA CTCACTACGT GATGTTGAAC CTACTGCCAC TTTCTATTTG
GTCGACGATG AGGAGTCACA GTCATGA
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| Protein sequence | MNNHNTPSTP PAKREVRDQM VDALRRELMG PWHPTDDTDP SEEFPTARYI VGRLAPQDFE
IDVVENDALP TGDSDDGETG EASFEPPQVL GFMPSSMGLS FVINDTCDKV DVYIEWGQYY
RAEEAPERNE VGDGYDEDER EWNSSQRSLF IWRRESCKGT VRGLDLSKKG PITEVKLHPK
FAPADVTVEG LDEAEVCIQG IVYEIHGQRA VSLFLVNQRQ KGDPKDSEKD KQFLMQAQME
VRASDGSAVF LAKDDIELEH DGSQDPEAQV NNLLYRHARE FATGHGVAAE WDGLTPDGKS
VSSIRTEFIP SFEVPKVIAA NDIAGGATLD MMALAKLNDP DALFNAIEPL VKKYEDWIED
RRLEANAPEI KDHALHYEAA GIQLDNCKNA ATRMRKGLEL LKSNPKARTA FCWANEAMAD
QRVHSIWAKD HKAGEKRKDI AEYWNKRNHT WRPFQLGFFL LNLVGVADDE SEDRALVDLL
WFPTGGGKTE AYLGLAAFTL FYRRLEGDRD GMEAGAGVSV IMRYTLRLLT VQQFQRAAAL
VCACEVIRRR ENLLGKEPYR IGLWVGDKTA PNRFVDAKKA IEDLKSKNYT HGGSPVQLLN
CPRCGEALAD DRGIPNGAAY TVDSDAQRIR VLCPNFRCEM SQKKSAGEGV PVVVVDEELY
RTCPSIIIAT VDKFARMPFE GRTQAFFGIR DRYSPTLGHI TPADGVKPGG KLCKDARKAK
RLLPPELIIQ DELHLISGPL GTMVGLYETA IDFLSRVQKE SGVTVRSKVI ASTATIRRAA
QQVRQLYDRD LQVFPPSALS SKDSFFAREI ATHDENGHAG DFEAGRLYIG ANASGSSSKT
LLVRVYAGLL HAGLDHLVDP VIAQSGDPYG TLVGYFNSMR ALGGAKRLVE DDVTLRRLYY
LARRDQSALK REKRNQRYIS EPKELTSRLA SWQIPPLLKR MDVTFPRPVK GEKNKVYPVD
VLLATNMISV GVDIDRLGLM VCTGQPKTTA EYIQATSRVG RQHPGLVVTM YNWVSPRDIS
HYERFKSYHA ALYRYVEPIS VTPFSSRALD RGLRGMFGAT QRLGQTQASE EFSANQFDPT
NPWAKAMIEG IAERATNLTS HSRQGVAQGD HVKRVLNEQS DSWSQLQNAS VSYFKKKSTK
NKDEDAAHHR LFRNLGEAKG GKWSAPNSLR DVEPTATFYL VDDEESQS
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