Gene Spea_1254 details

Gene Information

• Locus tag: Spea_1254
• ID: 5661653
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 1527312
• End bp: 1527938
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 641235816
• Product: transposase
• Protein accession: YP_001501116
• Protein GI: 157961082

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCAAT TCGAGTCATA CCATCAGTTA AACACACCAT CTCAATATCG ATATATAGAA 
AGCTACTTAT CTATCTTTGA AAGAGTATTG CATCAGCAAT TAGAATGTAA CAACCGTATT 
ACCTGTATAA GATTAGACTT ACGATTCCCT AAAGTTTCCA ACTATCAGGA CCCTAAAGTT 
ATTTCACGCT TTATCGATGC GCTTAAGGCG AGACTTAATG TTTGGAAATC ACAACATGCA 
ACCCAAGGTA AACAACATCA CCGACTTGGG TTTAGTTATG TCTGGGTCAG GGAACGTGCT 
GGTTCTCATA ACTGGCACTA TCATTTAGTG CTGTTCTTCA ATAAAGATGC GTTTGCTTAT 
TTAGGTGTTT TAGATTTAAA CAGAGACAAT ATGCGCTCTC GTCTTGTTGA GGCCTGGTCT 
AGCGCGACTG GGATGGTTGA TATCGAAGTT AAGTCTTTAG TACACATTTC CAGCAAAGAG 
ATTAAGTACT TAGATTCAAA CTCTGCAGAG TTTTATGACC AGTTAAATAG TTTTTGGCGA 
CAGTTTACCT ATTTGGCTAA GGTAGCAACC AAAGATATAA ATGACGGTAA TCGTAACATT 
GGTTATAGCC GAATAATGTT CAATTAG 

 

Protein sequence

MFQFESYHQL NTPSQYRYIE SYLSIFERVL HQQLECNNRI TCIRLDLRFP KVSNYQDPKV 
ISRFIDALKA RLNVWKSQHA TQGKQHHRLG FSYVWVRERA GSHNWHYHLV LFFNKDAFAY 
LGVLDLNRDN MRSRLVEAWS SATGMVDIEV KSLVHISSKE IKYLDSNSAE FYDQLNSFWR 
QFTYLAKVAT KDINDGNRNI GYSRIMFN