| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1251 |
|---|
| Symbol | |
|---|
| ID | 5661650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1524295 |
|---|
| End bp | 1524732 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641235813 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001501113 |
|---|
| Protein GI | 157961079 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3059] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGG AAAGAGGTTA TTTAGTCGGT CTAGCAGGTG TTGTACTTAC GCTATTATGG
ATTGGTGTAT TTAAGTTTAC TCCGACAGAG GCGGAAGCAA TTAGGCCACT AGTTGAAAGC
CACCCGTTAA TGAACTGGAT GTTCAGTATT TTAAGTGTCC AAGGGGTGTC AAACCTAATT
GGGGTTACTG AAATTATTGT CGCAATAGGT ATGGTTGTTG GTATTTGGAA GCCGAAAATT
GGTTATTGGA GTGGCCTAGC TGCAATAGTT ATCTTTATTA CGACATTGAG CTTCCTTTTC
ACTTTACCCG GAGTTTGGAA AATAGTTGAT GGTGTACCTG TAACAGAGTT TTTCATATTT
AAAGATGTCG TTTTCTTAGG TATTGCTTGG TTTAGTGTTG AACGAAGTCG AGAACTTATG
AATAAAGATA ATAACTAA
|
|---|
| Protein sequence | MQQERGYLVG LAGVVLTLLW IGVFKFTPTE AEAIRPLVES HPLMNWMFSI LSVQGVSNLI
GVTEIIVAIG MVVGIWKPKI GYWSGLAAIV IFITTLSFLF TLPGVWKIVD GVPVTEFFIF
KDVVFLGIAW FSVERSRELM NKDNN
|
|---|
| |