Gene Spea_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1248 
Symbol 
ID5661647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1522011 
End bp1522352 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content41% 
IMG OID641235810 
Productalkylphosphonate utilization operon protein PhnA 
Protein accessionYP_001501110 
Protein GI157961076 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 
TIGRFAM ID[TIGR00686] alkylphosphonate utilization operon protein PhnA 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA TGCCACCATG CCCAAAATGT GAGTCTGAAT ATGTATACGA AGACGGCTCA 
AACCTAGTTT GCCCAGAATG TGCTCATGAA TGGAACCCAA GCGAAGTTAT TGTTGATCCA
GATGCAATCA TCTTAAAAGA TGCTGTAGGT AACTTACTTG CTGAAGAAGA CAAAGTTACG
CTAATCAAAG ACCTTAAAGT TAAAGGTTCA TCGCTAATCC TGAAAGTAGG TACTAAAGCG
GTTATTAAGC GTTTTGTCGA TGCGGACCAC GATATTGACT GTAAAGTAGA TGGTCACGGC
CAGATGATGC TTAAGTCTAA GTTTGTAAGA AAGCAAAGCT AA
 
Protein sequence
MSAMPPCPKC ESEYVYEDGS NLVCPECAHE WNPSEVIVDP DAIILKDAVG NLLAEEDKVT 
LIKDLKVKGS SLILKVGTKA VIKRFVDADH DIDCKVDGHG QMMLKSKFVR KQS