Gene Spea_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1246 
Symbol 
ID5661645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1519846 
End bp1520373 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content48% 
IMG OID641235808 
ProductPEBP family protein 
Protein accessionYP_001501108 
Protein GI157961074 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTC TTGCTTTATC TATCGCCTTA ATTGCTTTTT CGGCTCATAG CTACGCCTTA 
GAGTTAACCA GTTCAGATAT CAGTGAAGGG CAGTTGATGT CGTCAAAGTT TGAATACAAG
GGCATGGGCT GTGACGGGGG GAATCTTTCA CCTCAGCTTA GCTGGAGTAA CGCGCCGAAG
GGGACTAAGA GTTTTGCGAT TACCGCATTC GATCCAGATG CGCCAACAGG CAGTGGCTGG
TGGCACTGGA CTGTGCTCAA CATTCCCGCC ACAACTACAT CGTTAGAGCA AGGTGCATCT
GGCAAGCTTA AAATCGGTCA TGAAACCAGA ACTGATTATG GCAAGCCAGG TTACGGTGGC
GTTTGTCCAC CAGAAGGCGA TGGCATGCAT CGTTACCAAT TCACTATCTG GGCGCTTCCA
GAGGCTAAAA TTGATCTGCC AACAGATATT TCCCCAGCTG TAGTGGGTTT CACGTTGAAT
AAAATTGCAC TAGATAAAGC TGTACTAACA GCAACTTATG TGCGTTAG
 
Protein sequence
MKRLALSIAL IAFSAHSYAL ELTSSDISEG QLMSSKFEYK GMGCDGGNLS PQLSWSNAPK 
GTKSFAITAF DPDAPTGSGW WHWTVLNIPA TTTSLEQGAS GKLKIGHETR TDYGKPGYGG
VCPPEGDGMH RYQFTIWALP EAKIDLPTDI SPAVVGFTLN KIALDKAVLT ATYVR