Gene Spea_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1245 
Symbol 
ID5661644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1518901 
End bp1519629 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content48% 
IMG OID641235807 
Productnitroreductase A 
Protein accessionYP_001501107 
Protein GI157961073 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATGA ATCACACCAT AGAAACCATT TTACAGCATC GTTCAATTAG GCACTTTACC 
GAGCAGCAGA TCGAAGCTGA AAAATTGAAA CTCATCTTAC GCTGTGCCAA TGCTGCCTCT
AGCTCCAGTT TTATACAGTG TAGCAGTATT ATCAGGGTTA CTTTGCCAAG CGTCAGGGCC
AAGCTGGCTG AGCTTGCGGG AGGGCAAGCC TATGTCGAGT CGGCAGCTGA GTTTCTGGTG
TTTTGCGCCG ACTTTAACCG TCATCAGCAA ATCCACCCAG CAGCCCAACT AGGTTTTACT
GAGCAAACAT TAATCGGTGC AGTCGATACC GCTTTAATGG GGCAAAATGC CATGTTAGCG
GCTGAGTCTA TGGGGCTCGG TGGTGTGTAT ATTGGCGGGA TCCGCAATGA CCCTAAGCTG
GTCTCAGAGC TCCTCGCTTT ACCTAGGCAT GTATTGCCAT TATTTGGTAT GTGCCTTGGC
TATCCGGCTA AAATACCGCA GCCAAAGCCA CGCTTACCAC TGAGTATCGT GGTCCACCAA
GAAAGTTATC AAAGCTTAGA TAATGCTGAA CTTGAGAAGT ACGATCAGCA TATACAAGCC
TATTACGCCA GCAGAAGCAG TAACAACAAG CAGACCTCTT GGTCCGATCA AATTAGGGCG
ACCCTGAGTA AGGAGTCAAG ACCCTTTATG CAGGCCTATC TAAACGGGCA GGGGTTTAGC
ACCAAGTGA
 
Protein sequence
MTMNHTIETI LQHRSIRHFT EQQIEAEKLK LILRCANAAS SSSFIQCSSI IRVTLPSVRA 
KLAELAGGQA YVESAAEFLV FCADFNRHQQ IHPAAQLGFT EQTLIGAVDT ALMGQNAMLA
AESMGLGGVY IGGIRNDPKL VSELLALPRH VLPLFGMCLG YPAKIPQPKP RLPLSIVVHQ
ESYQSLDNAE LEKYDQHIQA YYASRSSNNK QTSWSDQIRA TLSKESRPFM QAYLNGQGFS
TK