| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1243 |
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| Symbol | |
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| ID | 5661642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1516340 |
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| End bp | 1517866 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641235805 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001501105 |
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| Protein GI | 157961071 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGCC ATGTCTTAAA CCAACGACAT TCTTCTTGGC TTGTCTTTGC CTTGTTAATG
CTGTGCCTGA TCGTTTCTTA TATTCTGACT CAATATCAGC TATACAAAAA GCTTGAAGTC
AGGGTTAATG ACTTTGATAA CTTTTATAGC GAGCGCCTAG AAAGTGCTGA TCGAAGTTTA
CTTGCCGTAG AACAGGTGTT GAAAAATATA GAGGTGGGTA GATGCTCACA AGGGGTGGTA
ACGTCTCTTA AAGACTATAT CTTAACTTCA GATGCCTTAG CTATAGTTTG GGTAAATTTT
ATCGATGAGC CAATTCTCTG TTCGGCGCTA GGGGTTTCCC AATTACCAGA TCCCAAATAT
TATCCCGTGA TTGCTTCTAT GGGAAATGGG TTAAAGATCT ATCAAAAGGT GGATAGCGAT
AACCCAGATG AAAGAAAACC TGTTTATGTG GGACGGCATA CGGAGCAATA TCGCTGGTTT
ATCGGAATTG ATGTTTTGTC CTATATACAA GAAATATTAA AAAATTGTGA GGACTGTGGG
GCATTAAGTA TTCAGTTTAA TAGTAAGCAT GAGCTATTTA GGAAAAACAA AAGTGCTCCA
TACTGGGGAG CTATGCAATT TAACTCAGAA GTCACGGGGT TGACCTACAG GTTCTCCCTT
AATTTATATA GCAAGGCTTT ACTGTGGTTA ACTCACTTTG TCGGTGTCAT TGCTATCTCA
AGTATGTTTT TTGTTGGGTG GTTGTTACTT AGAGGTGTGT CAAGGCAATA TTATTGGCAC
CGTCTGTTTT TAAAGGCTCT GAAGAAGAAG GAGTTCAACT TAGTTTATCA GCCAGTGTTC
GATAATCTAA AGCAGGAGGT TATTGGTGTT GAGGTGCTAT TAAGATGGTT AAGGCCCGAT
GGCACAACAC GTAATACTGG AGAGTTTATT GGGATCCTTG AGAAAGATCC TATTATGCCA
GAGGTCACTC GCTGGGTCGT TAAAATGGCA TTGAATGAAC TTAAAGAGCA ATTAGATGGC
AAGCTTATAG GCTGGTGCAG TATCAATGTC AGCGCAATGG AAATTGAGCA GGGACAGATG
CTTCCATTTT TAAGGGAATT GGTGGAAGAG GGATATCCAG TAGAATACTT GAGCTTCGAG
TTGACAGAGC GGATACCAAT GAATAACTGG CAGCAACTTG AAGACTTTAT TAAAGCATGC
CAAGCACTAG GATGTAAGGT CAAACTGGAT GATGTGGGAA CTGGCTATGG TGGTAGTCTG
TGTTTACAGA ATTTAGACTT CGATTACCTG AAAATCGATC AACAGTTTGT TGGTCACTTA
GGCACGCCAG AAAGTAAGCT ATCTCTAATC GAGTCATATA TTGCGATTGC TAAAGAATTA
AATATTAGTG TCATCGCCGA AGGGGTAGAA ACCTTAGAAC AGGCTGAGAT CCTGAAAACA
CTCGGTGTTA ATCTGCAGCA GGGCTGGCTT TATTCAAAGG CATTGCCAGC TAGAGAGCTT
GAAGCGTACT TACTTAAAGC GACTTAA
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| Protein sequence | MLSHVLNQRH SSWLVFALLM LCLIVSYILT QYQLYKKLEV RVNDFDNFYS ERLESADRSL
LAVEQVLKNI EVGRCSQGVV TSLKDYILTS DALAIVWVNF IDEPILCSAL GVSQLPDPKY
YPVIASMGNG LKIYQKVDSD NPDERKPVYV GRHTEQYRWF IGIDVLSYIQ EILKNCEDCG
ALSIQFNSKH ELFRKNKSAP YWGAMQFNSE VTGLTYRFSL NLYSKALLWL THFVGVIAIS
SMFFVGWLLL RGVSRQYYWH RLFLKALKKK EFNLVYQPVF DNLKQEVIGV EVLLRWLRPD
GTTRNTGEFI GILEKDPIMP EVTRWVVKMA LNELKEQLDG KLIGWCSINV SAMEIEQGQM
LPFLRELVEE GYPVEYLSFE LTERIPMNNW QQLEDFIKAC QALGCKVKLD DVGTGYGGSL
CLQNLDFDYL KIDQQFVGHL GTPESKLSLI ESYIAIAKEL NISVIAEGVE TLEQAEILKT
LGVNLQQGWL YSKALPAREL EAYLLKAT
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