Gene Spea_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1240 
Symbol 
ID5661639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1513360 
End bp1514181 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content43% 
IMG OID641235802 
Producthypothetical protein 
Protein accessionYP_001501102 
Protein GI157961068 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAC TTACTGCTGT ATTACTCATG ATGGTCACTC AATCTGCGGC CTTTGCCAGT 
GATGAGTATG AGGTTGGGCC CGACTCTTAT GATGAGGGCA AAGATGAGTG GAACTATTTA
ATCGCCTTTC CCATGGTTTG GGCGCCTGAT ATTTCGGGCT CAATCTCAGC CGATGCAGAT
AGAGTCGATA TCGATGTCCC TTTCAAAAAT ATCATCGACA ACCTTAACTT CGGTGTGATT
GGTGAGCTTT ACGCACAAAA AGGCGATTGG CTCTATAGCC TTAGGATTAA CTATTTAAGA
GTTAAAAGCG ATAGCCAAAC AGAGGGTCTT AAAGGTCCGA TTACTGGCGG TATTATCTCA
CCTGGACATA ATATCGAAAC CGACATGCAC TTAGCCGTTA ATGACTTTCT AGCAGGCTAT
GAAGTTACGC CGGGTTTACG CTTATTTACC GGCGTACGCC ATGTATTCAG TAAAATTGAT
CTTAATGTCA AACCCTTAAG TGACGATGGA CTCATTCATA TTAATGCTAA TATTCCTATT
GCTGATGAGC ATCTTTTCGA TTGGTTAGTA GGTGTGACCT ACCGTTACTG GCTATCTGAG
TCTTGGGGCG TTTCTGTTGG CGCTGATACT AAGATCTACG GTGATAATGA CAGAGACTAT
GGCTTTAATG CTTCGGCGTT ATACCGTTTC GGGGATCTGC ATAATGTTTG GATAGGCTAT
CGCTACTTGC AAATAGGTAA CGACAGTGAG GTCGATGGGG TTCAGTATGA GATGGACTTT
ATTGAGAAAG GCCCACAAAT TGGCTGGGCC TTTAGTTTTT AA
 
Protein sequence
MKILTAVLLM MVTQSAAFAS DEYEVGPDSY DEGKDEWNYL IAFPMVWAPD ISGSISADAD 
RVDIDVPFKN IIDNLNFGVI GELYAQKGDW LYSLRINYLR VKSDSQTEGL KGPITGGIIS
PGHNIETDMH LAVNDFLAGY EVTPGLRLFT GVRHVFSKID LNVKPLSDDG LIHINANIPI
ADEHLFDWLV GVTYRYWLSE SWGVSVGADT KIYGDNDRDY GFNASALYRF GDLHNVWIGY
RYLQIGNDSE VDGVQYEMDF IEKGPQIGWA FSF