Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_1237 |
Symbol | |
ID | 5661636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 1507332 |
End bp | 1509491 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235799 |
Product | hypothetical protein |
Protein accession | YP_001501099 |
Protein GI | 157961065 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAT CCAAGCCAAC TCAATTTAGC TTCGGTTCCA TCTTACTTTT CGGGCTATTT ATTTCAGAAA ATGTCAGTGC GTCAGATCCC TTTAGTGCAT GCCCTACAGA AGCCTTTGTT ATCCAAAAAC AATCAAATAT TCCTAAAAGC TACGGCGTTA ACTTGGCTAC GGGTAGTTAT GTGGTTTTGT CGGAAGATAT GGGAACAGGC AATGGTTATA ACGGCGTAGG TTTTAACTAT CATGATAATT ACCTCTACGG CTGGGACTAC GCCAGTGCCT CACTCGGACG CACGGGGAAT GACTATCAGA TAACGGCACT GAGCGTCAGC AAGGATGCAG CATCAGCCTC GGCAGGTAAC TTCTTTGTGG GTGATATCGC CATCAATGAA AATGTTTGGT ATGGCTATAG AAAAGGTAAA GGGCTGTTTA AAATCCCACT GGATAATCCC GCTAACTACA GCATGACAGT GGTGCCAGAT AGTATCGATT TTGCCAGCTA CAATATCACC GACTTTGCCT TTCATCCCAG CGATGGTTAC CTGTACAGTA TCAGTAATGG TGCCTCAGGA AAGCTGCTAA GAATAGACCC CGCCACAGGT GAAGCGACAG ACTTAGGTAC AGTGATAACC TCTAGTGGCA ATAACTTTAC CTTCGGTGCA CAGTTCTTCG ACCCAGATGG CAACCTCTAT GTCAGTAACA ACAGCAATGG CTATATTTAC AAACTGAATG TTAATTCCTC CTCACCCACT AGCGTGTTAT TCGCCTATGG TCCAGCCTCT TCGAGTAATG ATGGCGCCCG CTGTGCCCTC GCCGAAGTCG TTGTCGGCGA TGATGTAGAT TTTGGTGACG CCCCAGACAG CTACGGTACC CTCTTAGCCT CAAATGGCGC GAGGCACACC ATGAGTGATG ATTTGTACTT GGGTGCCAGC GTTGATAATG AGTCCAACGG CTATCCATCG CCACTGAGTG ATGACAGCAG CGACAACTCC GATGATGAAG ATGGGGTATC AATGCCGACA GGGTTTGAGC TAGGGGAAAG CGCAATTTTA TTGGTCACCG CCAAAGGCAG CGAGGGTTAT CTAAATGCCT GGTTCGACTG GGATAGAGAC GGCAGCTTTA GCGCCGAAGA GCAGGCTATC ATTGGAGAAA GCCTCGCTGA CGGCCAAAAT AGTATTAGCA TCGATGTACC CAGCTGGGCT CGAGCTGGCT CCACTTGGGC ACGCTTTCGC CTTAGCACTC AGCAAGTGAT TAACCCAACA GGTGGCGTCG GCGATGGCGA GGTCGAAGAT TATGCAGTGA CCCTAACGGA AACAGGCGTG ACCATTAATT ACTATCCCTC CTCTTCCACC TACACCACTC TCGCCTACGA AGATCTCTAC CCAGATCAAG GTGACTTTGA TATGAATGAC GTGGTTATTC AATTACGTCT TATCGAGTAC GTTAAAAACG ATCAAGTCAG ACGCATCGGC TTTGAGGCGC AATTAGCCGC TATGGGCGCC GCCTACCATA ATGGTTTTGC CATTCACCTA CCCGGCGTCA GCCGCAGTAA AATTAAAGAG TCTGTCATCA GCTGGTCAAT TGATGGCGTA GCTCAAACAG ACTCCCCTCT CGAAACAGGA CAATCTAACG CGGTCTTTGT TTTCACTGAA GACTTAAAGC AGTACGTTAC ACTCGAGCAA GGCTGCCAGT ACCTTAGAAC AGAGACAGGT TGTGAGAGCG CCTATAGAAC CACTTGGTCA TTTGAGATCC CCTTTGAAAG CCCAGTGGAT GAAAACCTAG TCCCTGCATT CCCCTATGAT CCATTTATTT TTGCCACCCC TAATACTGAC CATGGGTTAG CCGCGAAAAA TGTGGTCGGT GCTCTTCCCG GTCGTCAGCT AGAGGTCCAC CTTAAGAATC AGGCTCCAAC CGATAAGTTC TCAACTAATT ATTTTGGTGC TCGAGACGAT GCGTCTAACC CGAGTGCAGG ACAATACTTC CAGGATGAAA ACGGCATGGC CTGGGCCATC GAGATCCCCG TCACTTGGAA GCACCCGAAA GAGAAAAAGC GCTTAGATAA TGCCTACACA GAGTTCGTCG ATTTTGCCGC CGACAGCACA GGTAACACCA ACCCGACTTG GTATGAGAAT GCCATTGAGT CATTGATATT TGACAACTAA
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Protein sequence | MRISKPTQFS FGSILLFGLF ISENVSASDP FSACPTEAFV IQKQSNIPKS YGVNLATGSY VVLSEDMGTG NGYNGVGFNY HDNYLYGWDY ASASLGRTGN DYQITALSVS KDAASASAGN FFVGDIAINE NVWYGYRKGK GLFKIPLDNP ANYSMTVVPD SIDFASYNIT DFAFHPSDGY LYSISNGASG KLLRIDPATG EATDLGTVIT SSGNNFTFGA QFFDPDGNLY VSNNSNGYIY KLNVNSSSPT SVLFAYGPAS SSNDGARCAL AEVVVGDDVD FGDAPDSYGT LLASNGARHT MSDDLYLGAS VDNESNGYPS PLSDDSSDNS DDEDGVSMPT GFELGESAIL LVTAKGSEGY LNAWFDWDRD GSFSAEEQAI IGESLADGQN SISIDVPSWA RAGSTWARFR LSTQQVINPT GGVGDGEVED YAVTLTETGV TINYYPSSST YTTLAYEDLY PDQGDFDMND VVIQLRLIEY VKNDQVRRIG FEAQLAAMGA AYHNGFAIHL PGVSRSKIKE SVISWSIDGV AQTDSPLETG QSNAVFVFTE DLKQYVTLEQ GCQYLRTETG CESAYRTTWS FEIPFESPVD ENLVPAFPYD PFIFATPNTD HGLAAKNVVG ALPGRQLEVH LKNQAPTDKF STNYFGARDD ASNPSAGQYF QDENGMAWAI EIPVTWKHPK EKKRLDNAYT EFVDFAADST GNTNPTWYEN AIESLIFDN
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