Gene Spea_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_1237 
Symbol 
ID5661636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp1507332 
End bp1509491 
Gene Length2160 bp 
Protein Length719 aa 
Translation table11 
GC content48% 
IMG OID641235799 
Producthypothetical protein 
Protein accessionYP_001501099 
Protein GI157961065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAT CCAAGCCAAC TCAATTTAGC TTCGGTTCCA TCTTACTTTT CGGGCTATTT 
ATTTCAGAAA ATGTCAGTGC GTCAGATCCC TTTAGTGCAT GCCCTACAGA AGCCTTTGTT
ATCCAAAAAC AATCAAATAT TCCTAAAAGC TACGGCGTTA ACTTGGCTAC GGGTAGTTAT
GTGGTTTTGT CGGAAGATAT GGGAACAGGC AATGGTTATA ACGGCGTAGG TTTTAACTAT
CATGATAATT ACCTCTACGG CTGGGACTAC GCCAGTGCCT CACTCGGACG CACGGGGAAT
GACTATCAGA TAACGGCACT GAGCGTCAGC AAGGATGCAG CATCAGCCTC GGCAGGTAAC
TTCTTTGTGG GTGATATCGC CATCAATGAA AATGTTTGGT ATGGCTATAG AAAAGGTAAA
GGGCTGTTTA AAATCCCACT GGATAATCCC GCTAACTACA GCATGACAGT GGTGCCAGAT
AGTATCGATT TTGCCAGCTA CAATATCACC GACTTTGCCT TTCATCCCAG CGATGGTTAC
CTGTACAGTA TCAGTAATGG TGCCTCAGGA AAGCTGCTAA GAATAGACCC CGCCACAGGT
GAAGCGACAG ACTTAGGTAC AGTGATAACC TCTAGTGGCA ATAACTTTAC CTTCGGTGCA
CAGTTCTTCG ACCCAGATGG CAACCTCTAT GTCAGTAACA ACAGCAATGG CTATATTTAC
AAACTGAATG TTAATTCCTC CTCACCCACT AGCGTGTTAT TCGCCTATGG TCCAGCCTCT
TCGAGTAATG ATGGCGCCCG CTGTGCCCTC GCCGAAGTCG TTGTCGGCGA TGATGTAGAT
TTTGGTGACG CCCCAGACAG CTACGGTACC CTCTTAGCCT CAAATGGCGC GAGGCACACC
ATGAGTGATG ATTTGTACTT GGGTGCCAGC GTTGATAATG AGTCCAACGG CTATCCATCG
CCACTGAGTG ATGACAGCAG CGACAACTCC GATGATGAAG ATGGGGTATC AATGCCGACA
GGGTTTGAGC TAGGGGAAAG CGCAATTTTA TTGGTCACCG CCAAAGGCAG CGAGGGTTAT
CTAAATGCCT GGTTCGACTG GGATAGAGAC GGCAGCTTTA GCGCCGAAGA GCAGGCTATC
ATTGGAGAAA GCCTCGCTGA CGGCCAAAAT AGTATTAGCA TCGATGTACC CAGCTGGGCT
CGAGCTGGCT CCACTTGGGC ACGCTTTCGC CTTAGCACTC AGCAAGTGAT TAACCCAACA
GGTGGCGTCG GCGATGGCGA GGTCGAAGAT TATGCAGTGA CCCTAACGGA AACAGGCGTG
ACCATTAATT ACTATCCCTC CTCTTCCACC TACACCACTC TCGCCTACGA AGATCTCTAC
CCAGATCAAG GTGACTTTGA TATGAATGAC GTGGTTATTC AATTACGTCT TATCGAGTAC
GTTAAAAACG ATCAAGTCAG ACGCATCGGC TTTGAGGCGC AATTAGCCGC TATGGGCGCC
GCCTACCATA ATGGTTTTGC CATTCACCTA CCCGGCGTCA GCCGCAGTAA AATTAAAGAG
TCTGTCATCA GCTGGTCAAT TGATGGCGTA GCTCAAACAG ACTCCCCTCT CGAAACAGGA
CAATCTAACG CGGTCTTTGT TTTCACTGAA GACTTAAAGC AGTACGTTAC ACTCGAGCAA
GGCTGCCAGT ACCTTAGAAC AGAGACAGGT TGTGAGAGCG CCTATAGAAC CACTTGGTCA
TTTGAGATCC CCTTTGAAAG CCCAGTGGAT GAAAACCTAG TCCCTGCATT CCCCTATGAT
CCATTTATTT TTGCCACCCC TAATACTGAC CATGGGTTAG CCGCGAAAAA TGTGGTCGGT
GCTCTTCCCG GTCGTCAGCT AGAGGTCCAC CTTAAGAATC AGGCTCCAAC CGATAAGTTC
TCAACTAATT ATTTTGGTGC TCGAGACGAT GCGTCTAACC CGAGTGCAGG ACAATACTTC
CAGGATGAAA ACGGCATGGC CTGGGCCATC GAGATCCCCG TCACTTGGAA GCACCCGAAA
GAGAAAAAGC GCTTAGATAA TGCCTACACA GAGTTCGTCG ATTTTGCCGC CGACAGCACA
GGTAACACCA ACCCGACTTG GTATGAGAAT GCCATTGAGT CATTGATATT TGACAACTAA
 
Protein sequence
MRISKPTQFS FGSILLFGLF ISENVSASDP FSACPTEAFV IQKQSNIPKS YGVNLATGSY 
VVLSEDMGTG NGYNGVGFNY HDNYLYGWDY ASASLGRTGN DYQITALSVS KDAASASAGN
FFVGDIAINE NVWYGYRKGK GLFKIPLDNP ANYSMTVVPD SIDFASYNIT DFAFHPSDGY
LYSISNGASG KLLRIDPATG EATDLGTVIT SSGNNFTFGA QFFDPDGNLY VSNNSNGYIY
KLNVNSSSPT SVLFAYGPAS SSNDGARCAL AEVVVGDDVD FGDAPDSYGT LLASNGARHT
MSDDLYLGAS VDNESNGYPS PLSDDSSDNS DDEDGVSMPT GFELGESAIL LVTAKGSEGY
LNAWFDWDRD GSFSAEEQAI IGESLADGQN SISIDVPSWA RAGSTWARFR LSTQQVINPT
GGVGDGEVED YAVTLTETGV TINYYPSSST YTTLAYEDLY PDQGDFDMND VVIQLRLIEY
VKNDQVRRIG FEAQLAAMGA AYHNGFAIHL PGVSRSKIKE SVISWSIDGV AQTDSPLETG
QSNAVFVFTE DLKQYVTLEQ GCQYLRTETG CESAYRTTWS FEIPFESPVD ENLVPAFPYD
PFIFATPNTD HGLAAKNVVG ALPGRQLEVH LKNQAPTDKF STNYFGARDD ASNPSAGQYF
QDENGMAWAI EIPVTWKHPK EKKRLDNAYT EFVDFAADST GNTNPTWYEN AIESLIFDN